Gene : Solyc08g067290.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K16274 - E3 ubiquitin-protein ligase AIP2 [EC:6.3.2.19] (AIP2) Description:  RING finger protein 6 (AHRD V1 *-*- RNF6_HUMAN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
Genomic Order:  1370 Name:  ? Solyc08g067290.2
Secondary Identifier:  ? PAC:36149863
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7511 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g067290.2 0.5kb upstream 0.5kb upstream 3993 true SL2.50ch08: 56348651-56352643 Solanum lycopersicum
Solyc08g067290.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 56352144-56352643 Solanum lycopersicum
Solyc08g067290.2 0.5kb downstream 0.5kb downstream 3993 true SL2.50ch08: 56348151-56352143 Solanum lycopersicum
Solyc08g067290.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 56348151-56348650 Solanum lycopersicum
Solyc08g067290.2 1.0kb upstream 1.0kb upstream 4493 true SL2.50ch08: 56348651-56353143 Solanum lycopersicum
Solyc08g067290.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 56352144-56353143 Solanum lycopersicum
Solyc08g067290.2 1.0kb downstream 1.0kb downstream 4493 true SL2.50ch08: 56347651-56352143 Solanum lycopersicum
Solyc08g067290.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 56347651-56348650 Solanum lycopersicum
Solyc08g067290.2 2.0kb upstream 2.0kb upstream 5493 true SL2.50ch08: 56348651-56354143 Solanum lycopersicum
Solyc08g067290.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 56352144-56354143 Solanum lycopersicum
Solyc08g067290.2 2.0kb downstream 2.0kb downstream 5493 true SL2.50ch08: 56346651-56352143 Solanum lycopersicum
Solyc08g067290.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 56346651-56348650 Solanum lycopersicum
Solyc08g067290.2 5.0kb upstream 5.0kb upstream 8493 true SL2.50ch08: 56348651-56357143 Solanum lycopersicum
Solyc08g067290.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 56352144-56357143 Solanum lycopersicum
Solyc08g067290.2 5.0kb downstream 5.0kb downstream 8493 true SL2.50ch08: 56343651-56352143 Solanum lycopersicum
Solyc08g067290.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 56343651-56348650 Solanum lycopersicum
Solyc08g067290.2 10.0kb upstream 10.0kb upstream 13493 true SL2.50ch08: 56348651-56362143 Solanum lycopersicum
Solyc08g067290.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 56352144-56362143 Solanum lycopersicum
Solyc08g067290.2 10.0kb downstream 10.0kb downstream 13493 true SL2.50ch08: 56338651-56352143 Solanum lycopersicum
Solyc08g067290.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 56338651-56348650 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
121469694 5263 Asterids View MSA
123738156 5271 Pentapetalae View MSA
122787757 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain