Gene : Solyc08g029000.2 S. lycopersicum ITAG2.4
Defline:  (1 of 9) K15718 - linoleate 9S-lipoxygenase (LOX1_5) Description:  Lipoxygenase (AHRD V1 **** Q43191_SOLTU); contains Interpro domain(s) IPR001246 Lipoxygenase, plant
Genomic Order:  890 Name:  ? Solyc08g029000.2
Secondary Identifier:  ? PAC:36149874
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5406 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g029000.2 0.5kb upstream 0.5kb upstream 4294 true SL2.50ch08: 38906886-38911179 Solanum lycopersicum
Solyc08g029000.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 38910680-38911179 Solanum lycopersicum
Solyc08g029000.2 0.5kb downstream 0.5kb downstream 4294 true SL2.50ch08: 38906386-38910679 Solanum lycopersicum
Solyc08g029000.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 38906386-38906885 Solanum lycopersicum
Solyc08g029000.2 1.0kb upstream 1.0kb upstream 4794 true SL2.50ch08: 38906886-38911679 Solanum lycopersicum
Solyc08g029000.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 38910680-38911679 Solanum lycopersicum
Solyc08g029000.2 1.0kb downstream 1.0kb downstream 4794 true SL2.50ch08: 38905886-38910679 Solanum lycopersicum
Solyc08g029000.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 38905886-38906885 Solanum lycopersicum
Solyc08g029000.2 2.0kb upstream 2.0kb upstream 5794 true SL2.50ch08: 38906886-38912679 Solanum lycopersicum
Solyc08g029000.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 38910680-38912679 Solanum lycopersicum
Solyc08g029000.2 2.0kb downstream 2.0kb downstream 5794 true SL2.50ch08: 38904886-38910679 Solanum lycopersicum
Solyc08g029000.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 38904886-38906885 Solanum lycopersicum
Solyc08g029000.2 5.0kb upstream 5.0kb upstream 8794 true SL2.50ch08: 38906886-38915679 Solanum lycopersicum
Solyc08g029000.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 38910680-38915679 Solanum lycopersicum
Solyc08g029000.2 5.0kb downstream 5.0kb downstream 8794 true SL2.50ch08: 38901886-38910679 Solanum lycopersicum
Solyc08g029000.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 38901886-38906885 Solanum lycopersicum
Solyc08g029000.2 10.0kb upstream 10.0kb upstream 13794 true SL2.50ch08: 38906886-38920679 Solanum lycopersicum
Solyc08g029000.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 38910680-38920679 Solanum lycopersicum
Solyc08g029000.2 10.0kb downstream 10.0kb downstream 13794 true SL2.50ch08: 38896886-38910679 Solanum lycopersicum
Solyc08g029000.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 38896886-38906885 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
121479154 5263 Asterids View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain