Gene : Solyc08g022210.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Description:  Methylthioribose-1-phosphate isomerase (AHRD V1 ***- B6TZD1_MAIZE); contains Interpro domain(s) IPR005251 Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase
Genomic Order:  809 Name:  ? Solyc08g022210.2
Secondary Identifier:  ? PAC:36151287
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-4361 Solanum lycopersicum pathologic  
Slycopersicum PWY-7270 Solanum lycopersicum pathologic  
Slycopersicum PWY-7528 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g022210.2 0.5kb upstream 0.5kb upstream 8410 true SL2.50ch08: 30362357-30370766 Solanum lycopersicum
Solyc08g022210.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 30362357-30362856 Solanum lycopersicum
Solyc08g022210.2 0.5kb downstream 0.5kb downstream 8410 true SL2.50ch08: 30362857-30371266 Solanum lycopersicum
Solyc08g022210.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 30370767-30371266 Solanum lycopersicum
Solyc08g022210.2 1.0kb upstream 1.0kb upstream 8910 true SL2.50ch08: 30361857-30370766 Solanum lycopersicum
Solyc08g022210.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 30361857-30362856 Solanum lycopersicum
Solyc08g022210.2 1.0kb downstream 1.0kb downstream 8910 true SL2.50ch08: 30362857-30371766 Solanum lycopersicum
Solyc08g022210.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 30370767-30371766 Solanum lycopersicum
Solyc08g022210.2 2.0kb upstream 2.0kb upstream 9910 true SL2.50ch08: 30360857-30370766 Solanum lycopersicum
Solyc08g022210.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 30360857-30362856 Solanum lycopersicum
Solyc08g022210.2 2.0kb downstream 2.0kb downstream 9910 true SL2.50ch08: 30362857-30372766 Solanum lycopersicum
Solyc08g022210.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 30370767-30372766 Solanum lycopersicum
Solyc08g022210.2 5.0kb upstream 5.0kb upstream 12910 true SL2.50ch08: 30357857-30370766 Solanum lycopersicum
Solyc08g022210.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 30357857-30362856 Solanum lycopersicum
Solyc08g022210.2 5.0kb downstream 5.0kb downstream 12910 true SL2.50ch08: 30362857-30375766 Solanum lycopersicum
Solyc08g022210.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 30370767-30375766 Solanum lycopersicum
Solyc08g022210.2 10.0kb upstream 10.0kb upstream 17910 true SL2.50ch08: 30352857-30370766 Solanum lycopersicum
Solyc08g022210.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 30352857-30362856 Solanum lycopersicum
Solyc08g022210.2 10.0kb downstream 10.0kb downstream 17910 true SL2.50ch08: 30362857-30380766 Solanum lycopersicum
Solyc08g022210.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 30370767-30380766 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473535 5263 Asterids View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain