Gene : Solyc08g013980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PF12579 - Protein of unknown function (DUF3755) (DUF3755) Description:  F21O3.28 protein (Fragment) (AHRD V1 *--- Q9SRQ9_ARATH)
Genomic Order:  393 Name:  ? Solyc08g013980.2
Secondary Identifier:  ? PAC:36151231
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g013980.2 0.5kb upstream 0.5kb upstream 4046 true SL2.50ch08: 3493696-3497741 Solanum lycopersicum
Solyc08g013980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 3493696-3494195 Solanum lycopersicum
Solyc08g013980.2 0.5kb downstream 0.5kb downstream 4046 true SL2.50ch08: 3494196-3498241 Solanum lycopersicum
Solyc08g013980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 3497742-3498241 Solanum lycopersicum
Solyc08g013980.2 1.0kb upstream 1.0kb upstream 4546 true SL2.50ch08: 3493196-3497741 Solanum lycopersicum
Solyc08g013980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 3493196-3494195 Solanum lycopersicum
Solyc08g013980.2 1.0kb downstream 1.0kb downstream 4546 true SL2.50ch08: 3494196-3498741 Solanum lycopersicum
Solyc08g013980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 3497742-3498741 Solanum lycopersicum
Solyc08g013980.2 2.0kb upstream 2.0kb upstream 5546 true SL2.50ch08: 3492196-3497741 Solanum lycopersicum
Solyc08g013980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 3492196-3494195 Solanum lycopersicum
Solyc08g013980.2 2.0kb downstream 2.0kb downstream 5546 true SL2.50ch08: 3494196-3499741 Solanum lycopersicum
Solyc08g013980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 3497742-3499741 Solanum lycopersicum
Solyc08g013980.2 5.0kb upstream 5.0kb upstream 8546 true SL2.50ch08: 3489196-3497741 Solanum lycopersicum
Solyc08g013980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 3489196-3494195 Solanum lycopersicum
Solyc08g013980.2 5.0kb downstream 5.0kb downstream 8546 true SL2.50ch08: 3494196-3502741 Solanum lycopersicum
Solyc08g013980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 3497742-3502741 Solanum lycopersicum
Solyc08g013980.2 10.0kb upstream 10.0kb upstream 13546 true SL2.50ch08: 3484196-3497741 Solanum lycopersicum
Solyc08g013980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 3484196-3494195 Solanum lycopersicum
Solyc08g013980.2 10.0kb downstream 10.0kb downstream 13546 true SL2.50ch08: 3494196-3507741 Solanum lycopersicum
Solyc08g013980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 3497742-3507741 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041164 5273 Angiosperm View MSA
121385326 5263 Asterids View MSA
123747001 5271 Pentapetalae View MSA
122788149 5272 Eudicot View MSA
121349043 5274 Embryophyte View MSA
123381139 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain