Gene : Solyc07g016200.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K02738 - 20S proteasome subunit beta 1 (PSMB6) Description:  Proteasome subunit beta type (AHRD V1 ***- B9SPS6_RICCO); contains Interpro domain(s) IPR000243 Peptidase T1A, proteasome beta-subunit
Genomic Order:  520 Name:  ? Solyc07g016200.2
Secondary Identifier:  ? PAC:36160939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g016200.2 0.5kb upstream 0.5kb upstream 9574 true SL2.50ch07: 6442412-6451985 Solanum lycopersicum
Solyc07g016200.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 6451486-6451985 Solanum lycopersicum
Solyc07g016200.2 0.5kb downstream 0.5kb downstream 9574 true SL2.50ch07: 6441912-6451485 Solanum lycopersicum
Solyc07g016200.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 6441912-6442411 Solanum lycopersicum
Solyc07g016200.2 1.0kb upstream 1.0kb upstream 10074 true SL2.50ch07: 6442412-6452485 Solanum lycopersicum
Solyc07g016200.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 6451486-6452485 Solanum lycopersicum
Solyc07g016200.2 1.0kb downstream 1.0kb downstream 10074 true SL2.50ch07: 6441412-6451485 Solanum lycopersicum
Solyc07g016200.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 6441412-6442411 Solanum lycopersicum
Solyc07g016200.2 2.0kb upstream 2.0kb upstream 11074 true SL2.50ch07: 6442412-6453485 Solanum lycopersicum
Solyc07g016200.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 6451486-6453485 Solanum lycopersicum
Solyc07g016200.2 2.0kb downstream 2.0kb downstream 11074 true SL2.50ch07: 6440412-6451485 Solanum lycopersicum
Solyc07g016200.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 6440412-6442411 Solanum lycopersicum
Solyc07g016200.2 5.0kb upstream 5.0kb upstream 14074 true SL2.50ch07: 6442412-6456485 Solanum lycopersicum
Solyc07g016200.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 6451486-6456485 Solanum lycopersicum
Solyc07g016200.2 5.0kb downstream 5.0kb downstream 14074 true SL2.50ch07: 6437412-6451485 Solanum lycopersicum
Solyc07g016200.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 6437412-6442411 Solanum lycopersicum
Solyc07g016200.2 10.0kb upstream 10.0kb upstream 19074 true SL2.50ch07: 6442412-6461485 Solanum lycopersicum
Solyc07g016200.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 6451486-6461485 Solanum lycopersicum
Solyc07g016200.2 10.0kb downstream 10.0kb downstream 19074 true SL2.50ch07: 6432412-6451485 Solanum lycopersicum
Solyc07g016200.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 6432412-6442411 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477425 5263 Asterids View MSA
123739837 5271 Pentapetalae View MSA
122787112 5272 Eudicot View MSA
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain