Gene : Solyc07g017940.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14849 - ribosomal RNA-processing protein 1 (RRP1) Description:  Ribosomal RNA processing protein 1 homolog B (AHRD V1 *--- RRP1B_HUMAN); contains Interpro domain(s) IPR010301 Nucleolar, Nop52
Genomic Order:  593 Name:  ? Solyc07g017940.1
Secondary Identifier:  ? PAC:36160915
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g017940.1 0.5kb upstream 0.5kb upstream 2270 true SL2.50ch07: 8625900-8628169 Solanum lycopersicum
Solyc07g017940.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 8625900-8626399 Solanum lycopersicum
Solyc07g017940.1 0.5kb downstream 0.5kb downstream 2270 true SL2.50ch07: 8626400-8628669 Solanum lycopersicum
Solyc07g017940.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 8628170-8628669 Solanum lycopersicum
Solyc07g017940.1 1.0kb upstream 1.0kb upstream 2770 true SL2.50ch07: 8625400-8628169 Solanum lycopersicum
Solyc07g017940.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 8625400-8626399 Solanum lycopersicum
Solyc07g017940.1 1.0kb downstream 1.0kb downstream 2770 true SL2.50ch07: 8626400-8629169 Solanum lycopersicum
Solyc07g017940.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 8628170-8629169 Solanum lycopersicum
Solyc07g017940.1 2.0kb upstream 2.0kb upstream 3770 true SL2.50ch07: 8624400-8628169 Solanum lycopersicum
Solyc07g017940.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 8624400-8626399 Solanum lycopersicum
Solyc07g017940.1 2.0kb downstream 2.0kb downstream 3770 true SL2.50ch07: 8626400-8630169 Solanum lycopersicum
Solyc07g017940.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 8628170-8630169 Solanum lycopersicum
Solyc07g017940.1 5.0kb upstream 5.0kb upstream 6770 true SL2.50ch07: 8621400-8628169 Solanum lycopersicum
Solyc07g017940.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 8621400-8626399 Solanum lycopersicum
Solyc07g017940.1 5.0kb downstream 5.0kb downstream 6770 true SL2.50ch07: 8626400-8633169 Solanum lycopersicum
Solyc07g017940.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 8628170-8633169 Solanum lycopersicum
Solyc07g017940.1 10.0kb upstream 10.0kb upstream 11770 true SL2.50ch07: 8616400-8628169 Solanum lycopersicum
Solyc07g017940.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 8616400-8626399 Solanum lycopersicum
Solyc07g017940.1 10.0kb downstream 10.0kb downstream 11770 true SL2.50ch07: 8626400-8638169 Solanum lycopersicum
Solyc07g017940.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 8628170-8638169 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041241 5273 Angiosperm View MSA
121467654 5263 Asterids View MSA
123737116 5271 Pentapetalae View MSA
122788031 5272 Eudicot View MSA
121344172 5274 Embryophyte View MSA
123424078 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain