Gene : Solyc07g017760.1 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7L2S7_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  575 Name:  ? Solyc07g017760.1
Secondary Identifier:  ? PAC:36160349
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g017760.1 0.5kb upstream 0.5kb upstream 3029 true SL2.50ch07: 7943396-7946424 Solanum lycopersicum
Solyc07g017760.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 7945925-7946424 Solanum lycopersicum
Solyc07g017760.1 0.5kb downstream 0.5kb downstream 3029 true SL2.50ch07: 7942896-7945924 Solanum lycopersicum
Solyc07g017760.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 7942896-7943395 Solanum lycopersicum
Solyc07g017760.1 1.0kb upstream 1.0kb upstream 3529 true SL2.50ch07: 7943396-7946924 Solanum lycopersicum
Solyc07g017760.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 7945925-7946924 Solanum lycopersicum
Solyc07g017760.1 1.0kb downstream 1.0kb downstream 3529 true SL2.50ch07: 7942396-7945924 Solanum lycopersicum
Solyc07g017760.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 7942396-7943395 Solanum lycopersicum
Solyc07g017760.1 2.0kb upstream 2.0kb upstream 4529 true SL2.50ch07: 7943396-7947924 Solanum lycopersicum
Solyc07g017760.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 7945925-7947924 Solanum lycopersicum
Solyc07g017760.1 2.0kb downstream 2.0kb downstream 4529 true SL2.50ch07: 7941396-7945924 Solanum lycopersicum
Solyc07g017760.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 7941396-7943395 Solanum lycopersicum
Solyc07g017760.1 5.0kb upstream 5.0kb upstream 7529 true SL2.50ch07: 7943396-7950924 Solanum lycopersicum
Solyc07g017760.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 7945925-7950924 Solanum lycopersicum
Solyc07g017760.1 5.0kb downstream 5.0kb downstream 7529 true SL2.50ch07: 7938396-7945924 Solanum lycopersicum
Solyc07g017760.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 7938396-7943395 Solanum lycopersicum
Solyc07g017760.1 10.0kb upstream 10.0kb upstream 12529 true SL2.50ch07: 7943396-7955924 Solanum lycopersicum
Solyc07g017760.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 7945925-7955924 Solanum lycopersicum
Solyc07g017760.1 10.0kb downstream 10.0kb downstream 12529 true SL2.50ch07: 7933396-7945924 Solanum lycopersicum
Solyc07g017760.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 7933396-7943395 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471124 5263 Asterids View MSA
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain