Gene : Solyc07g009160.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR12941 - ER MEMBRANE PROTEIN COMPLEX Description:  Neighbor of COX4 (AHRD V1 ***- D3PHS4_9MAXI); contains Interpro domain(s) IPR005366 Uncharacterised protein family UPF0172
Genomic Order:  417 Name:  ? Solyc07g009160.2
Secondary Identifier:  ? PAC:36159894
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g009160.2 0.5kb upstream 0.5kb upstream 6707 true SL2.50ch07: 4203555-4210261 Solanum lycopersicum
Solyc07g009160.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 4203555-4204054 Solanum lycopersicum
Solyc07g009160.2 0.5kb downstream 0.5kb downstream 6707 true SL2.50ch07: 4204055-4210761 Solanum lycopersicum
Solyc07g009160.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 4210262-4210761 Solanum lycopersicum
Solyc07g009160.2 1.0kb upstream 1.0kb upstream 7207 true SL2.50ch07: 4203055-4210261 Solanum lycopersicum
Solyc07g009160.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 4203055-4204054 Solanum lycopersicum
Solyc07g009160.2 1.0kb downstream 1.0kb downstream 7207 true SL2.50ch07: 4204055-4211261 Solanum lycopersicum
Solyc07g009160.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 4210262-4211261 Solanum lycopersicum
Solyc07g009160.2 2.0kb upstream 2.0kb upstream 8207 true SL2.50ch07: 4202055-4210261 Solanum lycopersicum
Solyc07g009160.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 4202055-4204054 Solanum lycopersicum
Solyc07g009160.2 2.0kb downstream 2.0kb downstream 8207 true SL2.50ch07: 4204055-4212261 Solanum lycopersicum
Solyc07g009160.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 4210262-4212261 Solanum lycopersicum
Solyc07g009160.2 5.0kb upstream 5.0kb upstream 11207 true SL2.50ch07: 4199055-4210261 Solanum lycopersicum
Solyc07g009160.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 4199055-4204054 Solanum lycopersicum
Solyc07g009160.2 5.0kb downstream 5.0kb downstream 11207 true SL2.50ch07: 4204055-4215261 Solanum lycopersicum
Solyc07g009160.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 4210262-4215261 Solanum lycopersicum
Solyc07g009160.2 10.0kb upstream 10.0kb upstream 16207 true SL2.50ch07: 4194055-4210261 Solanum lycopersicum
Solyc07g009160.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 4194055-4204054 Solanum lycopersicum
Solyc07g009160.2 10.0kb downstream 10.0kb downstream 16207 true SL2.50ch07: 4204055-4220261 Solanum lycopersicum
Solyc07g009160.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 4210262-4220261 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477391 5263 Asterids View MSA
123743483 5271 Pentapetalae View MSA
122794438 5272 Eudicot View MSA
122048764 5273 Angiosperm View MSA
121351513 5274 Embryophyte View MSA
123425734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain