Gene : Solyc07g009000.1 S. lycopersicum ITAG2.4
Defline:  (1 of 11) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Description:  Photosystem II CP43 chlorophyll apoprotein (AHRD V1 ***- C8XU03_COILA); contains Interpro domain(s) IPR000932 Photosystem antenna protein-like
Genomic Order:  401 Name:  ? Solyc07g009000.1
Secondary Identifier:  ? PAC:36162296
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g009000.1 0.5kb upstream 0.5kb upstream 930 true SL2.50ch07: 4008033-4008962 Solanum lycopersicum
Solyc07g009000.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 4008033-4008532 Solanum lycopersicum
Solyc07g009000.1 0.5kb downstream 0.5kb downstream 930 true SL2.50ch07: 4008533-4009462 Solanum lycopersicum
Solyc07g009000.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 4008963-4009462 Solanum lycopersicum
Solyc07g009000.1 1.0kb upstream 1.0kb upstream 1430 true SL2.50ch07: 4007533-4008962 Solanum lycopersicum
Solyc07g009000.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 4007533-4008532 Solanum lycopersicum
Solyc07g009000.1 1.0kb downstream 1.0kb downstream 1430 true SL2.50ch07: 4008533-4009962 Solanum lycopersicum
Solyc07g009000.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 4008963-4009962 Solanum lycopersicum
Solyc07g009000.1 2.0kb upstream 2.0kb upstream 2430 true SL2.50ch07: 4006533-4008962 Solanum lycopersicum
Solyc07g009000.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 4006533-4008532 Solanum lycopersicum
Solyc07g009000.1 2.0kb downstream 2.0kb downstream 2430 true SL2.50ch07: 4008533-4010962 Solanum lycopersicum
Solyc07g009000.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 4008963-4010962 Solanum lycopersicum
Solyc07g009000.1 5.0kb upstream 5.0kb upstream 5430 true SL2.50ch07: 4003533-4008962 Solanum lycopersicum
Solyc07g009000.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 4003533-4008532 Solanum lycopersicum
Solyc07g009000.1 5.0kb downstream 5.0kb downstream 5430 true SL2.50ch07: 4008533-4013962 Solanum lycopersicum
Solyc07g009000.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 4008963-4013962 Solanum lycopersicum
Solyc07g009000.1 10.0kb upstream 10.0kb upstream 10430 true SL2.50ch07: 3998533-4008962 Solanum lycopersicum
Solyc07g009000.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 3998533-4008532 Solanum lycopersicum
Solyc07g009000.1 10.0kb downstream 10.0kb downstream 10430 true SL2.50ch07: 4008533-4018962 Solanum lycopersicum
Solyc07g009000.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 4008963-4018962 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481747 5263 Asterids View MSA
123752529 5271 Pentapetalae View MSA
122774617 5272 Eudicot View MSA
122048462 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121310978 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain