Gene : Solyc07g016050.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF05889 - O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS (SepSecS) Description:  Lysine decarboxylase (AHRD V1 **** Q8YMP6_ANASP); contains Interpro domain(s) IPR000310 Orn/Lys/Arg decarboxylase, major region
Genomic Order:  505 Name:  ? Solyc07g016050.2
Secondary Identifier:  ? PAC:36160741
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum POLYAMINSYN3-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-43 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g016050.2 0.5kb upstream 0.5kb upstream 1621 true SL2.50ch07: 6214759-6216379 Solanum lycopersicum
Solyc07g016050.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 6214759-6215258 Solanum lycopersicum
Solyc07g016050.2 0.5kb downstream 0.5kb downstream 1621 true SL2.50ch07: 6215259-6216879 Solanum lycopersicum
Solyc07g016050.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 6216380-6216879 Solanum lycopersicum
Solyc07g016050.2 1.0kb upstream 1.0kb upstream 2121 true SL2.50ch07: 6214259-6216379 Solanum lycopersicum
Solyc07g016050.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 6214259-6215258 Solanum lycopersicum
Solyc07g016050.2 1.0kb downstream 1.0kb downstream 2121 true SL2.50ch07: 6215259-6217379 Solanum lycopersicum
Solyc07g016050.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 6216380-6217379 Solanum lycopersicum
Solyc07g016050.2 2.0kb upstream 2.0kb upstream 3121 true SL2.50ch07: 6213259-6216379 Solanum lycopersicum
Solyc07g016050.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 6213259-6215258 Solanum lycopersicum
Solyc07g016050.2 2.0kb downstream 2.0kb downstream 3121 true SL2.50ch07: 6215259-6218379 Solanum lycopersicum
Solyc07g016050.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 6216380-6218379 Solanum lycopersicum
Solyc07g016050.2 5.0kb upstream 5.0kb upstream 6121 true SL2.50ch07: 6210259-6216379 Solanum lycopersicum
Solyc07g016050.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 6210259-6215258 Solanum lycopersicum
Solyc07g016050.2 5.0kb downstream 5.0kb downstream 6121 true SL2.50ch07: 6215259-6221379 Solanum lycopersicum
Solyc07g016050.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 6216380-6221379 Solanum lycopersicum
Solyc07g016050.2 10.0kb upstream 10.0kb upstream 11121 true SL2.50ch07: 6205259-6216379 Solanum lycopersicum
Solyc07g016050.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 6205259-6215258 Solanum lycopersicum
Solyc07g016050.2 10.0kb downstream 10.0kb downstream 11121 true SL2.50ch07: 6215259-6226379 Solanum lycopersicum
Solyc07g016050.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 6216380-6226379 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121712436 5273 Angiosperm View MSA
121388325 5263 Asterids View MSA
123669015 5271 Pentapetalae View MSA
122702908 5272 Eudicot View MSA
120984162 5274 Embryophyte View MSA
123024348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain