Gene : Solyc08g081000.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10694:SF8 - LYSINE-SPECIFIC DEMETHYLASE LID Description:  Lysine-specific demethylase 5D (AHRD V1 *--- KDM5D_MOUSE); contains Interpro domain(s) IPR013129 Transcription factor jumonji
Genomic Order:  2223 Name:  ? Solyc08g081000.2
Secondary Identifier:  ? PAC:36149877
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g081000.2 0.5kb upstream 0.5kb upstream 24632 true SL2.50ch08: 64114219-64138850 Solanum lycopersicum
Solyc08g081000.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 64138351-64138850 Solanum lycopersicum
Solyc08g081000.2 0.5kb downstream 0.5kb downstream 24632 true SL2.50ch08: 64113719-64138350 Solanum lycopersicum
Solyc08g081000.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 64113719-64114218 Solanum lycopersicum
Solyc08g081000.2 1.0kb upstream 1.0kb upstream 25132 true SL2.50ch08: 64114219-64139350 Solanum lycopersicum
Solyc08g081000.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 64138351-64139350 Solanum lycopersicum
Solyc08g081000.2 1.0kb downstream 1.0kb downstream 25132 true SL2.50ch08: 64113219-64138350 Solanum lycopersicum
Solyc08g081000.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 64113219-64114218 Solanum lycopersicum
Solyc08g081000.2 2.0kb upstream 2.0kb upstream 26132 true SL2.50ch08: 64114219-64140350 Solanum lycopersicum
Solyc08g081000.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 64138351-64140350 Solanum lycopersicum
Solyc08g081000.2 2.0kb downstream 2.0kb downstream 26132 true SL2.50ch08: 64112219-64138350 Solanum lycopersicum
Solyc08g081000.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 64112219-64114218 Solanum lycopersicum
Solyc08g081000.2 5.0kb upstream 5.0kb upstream 29132 true SL2.50ch08: 64114219-64143350 Solanum lycopersicum
Solyc08g081000.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 64138351-64143350 Solanum lycopersicum
Solyc08g081000.2 5.0kb downstream 5.0kb downstream 29132 true SL2.50ch08: 64109219-64138350 Solanum lycopersicum
Solyc08g081000.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 64109219-64114218 Solanum lycopersicum
Solyc08g081000.2 10.0kb upstream 10.0kb upstream 34132 true SL2.50ch08: 64114219-64148350 Solanum lycopersicum
Solyc08g081000.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 64138351-64148350 Solanum lycopersicum
Solyc08g081000.2 10.0kb downstream 10.0kb downstream 34132 true SL2.50ch08: 64104219-64138350 Solanum lycopersicum
Solyc08g081000.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 64104219-64114218 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470056 5263 Asterids View MSA
123738333 5271 Pentapetalae View MSA
122792222 5272 Eudicot View MSA
122044842 5273 Angiosperm View MSA
121344507 5274 Embryophyte View MSA
123426516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain