Gene : Solyc07g062650.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) K00026 - malate dehydrogenase (MDH2) Description:  Malate dehydrogenase (AHRD V1 **** Q645N1_SOLLC); contains Interpro domain(s) IPR010097 Malate dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria
Genomic Order:  2094 Name:  ? Solyc07g062650.2
Secondary Identifier:  ? PAC:36161088
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLUCONEO-PWY Solanum lycopersicum pathologic  
Slycopersicum GLYOXYLATE-BYPASS Solanum lycopersicum pathologic  
Slycopersicum PWY-5464 Solanum lycopersicum pathologic  
Slycopersicum PWY-561 Solanum lycopersicum pathologic  
Slycopersicum PWY-5690 Solanum lycopersicum pathologic  
Slycopersicum PWY-7115 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g062650.2 0.5kb upstream 0.5kb upstream 3766 true SL2.50ch07: 65337777-65341542 Solanum lycopersicum
Solyc07g062650.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 65337777-65338276 Solanum lycopersicum
Solyc07g062650.2 0.5kb downstream 0.5kb downstream 3766 true SL2.50ch07: 65338277-65342042 Solanum lycopersicum
Solyc07g062650.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 65341543-65342042 Solanum lycopersicum
Solyc07g062650.2 1.0kb upstream 1.0kb upstream 4266 true SL2.50ch07: 65337277-65341542 Solanum lycopersicum
Solyc07g062650.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 65337277-65338276 Solanum lycopersicum
Solyc07g062650.2 1.0kb downstream 1.0kb downstream 4266 true SL2.50ch07: 65338277-65342542 Solanum lycopersicum
Solyc07g062650.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 65341543-65342542 Solanum lycopersicum
Solyc07g062650.2 2.0kb upstream 2.0kb upstream 5266 true SL2.50ch07: 65336277-65341542 Solanum lycopersicum
Solyc07g062650.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 65336277-65338276 Solanum lycopersicum
Solyc07g062650.2 2.0kb downstream 2.0kb downstream 5266 true SL2.50ch07: 65338277-65343542 Solanum lycopersicum
Solyc07g062650.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 65341543-65343542 Solanum lycopersicum
Solyc07g062650.2 5.0kb upstream 5.0kb upstream 8266 true SL2.50ch07: 65333277-65341542 Solanum lycopersicum
Solyc07g062650.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 65333277-65338276 Solanum lycopersicum
Solyc07g062650.2 5.0kb downstream 5.0kb downstream 8266 true SL2.50ch07: 65338277-65346542 Solanum lycopersicum
Solyc07g062650.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 65341543-65346542 Solanum lycopersicum
Solyc07g062650.2 10.0kb upstream 10.0kb upstream 13266 true SL2.50ch07: 65328277-65341542 Solanum lycopersicum
Solyc07g062650.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 65328277-65338276 Solanum lycopersicum
Solyc07g062650.2 10.0kb downstream 10.0kb downstream 13266 true SL2.50ch07: 65338277-65351542 Solanum lycopersicum
Solyc07g062650.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 65341543-65351542 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480753 5263 Asterids View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain