Gene : Solyc07g052110.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.1.1.178 - 16S rRNA (cytosine(1407)-C(5))-methyltransferase Description:  Ribosomal RNA small subunit methyltransferase F (AHRD V1 *-*- RSMF_KLEP7); contains Interpro domain(s) IPR011023 Nop2p
Genomic Order:  1551 Name:  ? Solyc07g052110.2
Secondary Identifier:  ? PAC:36161484
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g052110.2 0.5kb upstream 0.5kb upstream 9700 true SL2.50ch07: 60654811-60664510 Solanum lycopersicum
Solyc07g052110.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 60654811-60655310 Solanum lycopersicum
Solyc07g052110.2 0.5kb downstream 0.5kb downstream 9700 true SL2.50ch07: 60655311-60665010 Solanum lycopersicum
Solyc07g052110.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 60664511-60665010 Solanum lycopersicum
Solyc07g052110.2 1.0kb upstream 1.0kb upstream 10200 true SL2.50ch07: 60654311-60664510 Solanum lycopersicum
Solyc07g052110.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 60654311-60655310 Solanum lycopersicum
Solyc07g052110.2 1.0kb downstream 1.0kb downstream 10200 true SL2.50ch07: 60655311-60665510 Solanum lycopersicum
Solyc07g052110.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 60664511-60665510 Solanum lycopersicum
Solyc07g052110.2 2.0kb upstream 2.0kb upstream 11200 true SL2.50ch07: 60653311-60664510 Solanum lycopersicum
Solyc07g052110.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 60653311-60655310 Solanum lycopersicum
Solyc07g052110.2 2.0kb downstream 2.0kb downstream 11200 true SL2.50ch07: 60655311-60666510 Solanum lycopersicum
Solyc07g052110.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 60664511-60666510 Solanum lycopersicum
Solyc07g052110.2 5.0kb upstream 5.0kb upstream 14200 true SL2.50ch07: 60650311-60664510 Solanum lycopersicum
Solyc07g052110.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 60650311-60655310 Solanum lycopersicum
Solyc07g052110.2 5.0kb downstream 5.0kb downstream 14200 true SL2.50ch07: 60655311-60669510 Solanum lycopersicum
Solyc07g052110.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 60664511-60669510 Solanum lycopersicum
Solyc07g052110.2 10.0kb upstream 10.0kb upstream 19200 true SL2.50ch07: 60645311-60664510 Solanum lycopersicum
Solyc07g052110.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 60645311-60655310 Solanum lycopersicum
Solyc07g052110.2 10.0kb downstream 10.0kb downstream 19200 true SL2.50ch07: 60655311-60674510 Solanum lycopersicum
Solyc07g052110.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 60664511-60674510 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473447 5263 Asterids View MSA
123740047 5271 Pentapetalae View MSA
122787436 5272 Eudicot View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain