Gene : Solyc07g042980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR22870:SF138 - REGULATOR OF CHROMOSOME CONDENSATION DOMAIN-CONTAINING PROTEIN Description:  Regulator of chromosome condensation (RCC1)-like protein (AHRD V1 **-- D0NEM9_PHYIN); contains Interpro domain(s) IPR009091 Regulator of chromosome condensation/beta-lactamase-inhibitor protein II
Genomic Order:  1244 Name:  ? Solyc07g042980.2
Secondary Identifier:  ? PAC:36160999
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g042980.2 0.5kb upstream 0.5kb upstream 6673 true SL2.50ch07: 56516266-56522938 Solanum lycopersicum
Solyc07g042980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 56516266-56516765 Solanum lycopersicum
Solyc07g042980.2 0.5kb downstream 0.5kb downstream 6673 true SL2.50ch07: 56516766-56523438 Solanum lycopersicum
Solyc07g042980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 56522939-56523438 Solanum lycopersicum
Solyc07g042980.2 1.0kb upstream 1.0kb upstream 7173 true SL2.50ch07: 56515766-56522938 Solanum lycopersicum
Solyc07g042980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 56515766-56516765 Solanum lycopersicum
Solyc07g042980.2 1.0kb downstream 1.0kb downstream 7173 true SL2.50ch07: 56516766-56523938 Solanum lycopersicum
Solyc07g042980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 56522939-56523938 Solanum lycopersicum
Solyc07g042980.2 2.0kb upstream 2.0kb upstream 8173 true SL2.50ch07: 56514766-56522938 Solanum lycopersicum
Solyc07g042980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 56514766-56516765 Solanum lycopersicum
Solyc07g042980.2 2.0kb downstream 2.0kb downstream 8173 true SL2.50ch07: 56516766-56524938 Solanum lycopersicum
Solyc07g042980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 56522939-56524938 Solanum lycopersicum
Solyc07g042980.2 5.0kb upstream 5.0kb upstream 11173 true SL2.50ch07: 56511766-56522938 Solanum lycopersicum
Solyc07g042980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 56511766-56516765 Solanum lycopersicum
Solyc07g042980.2 5.0kb downstream 5.0kb downstream 11173 true SL2.50ch07: 56516766-56527938 Solanum lycopersicum
Solyc07g042980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 56522939-56527938 Solanum lycopersicum
Solyc07g042980.2 10.0kb upstream 10.0kb upstream 16173 true SL2.50ch07: 56506766-56522938 Solanum lycopersicum
Solyc07g042980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 56506766-56516765 Solanum lycopersicum
Solyc07g042980.2 10.0kb downstream 10.0kb downstream 16173 true SL2.50ch07: 56516766-56532938 Solanum lycopersicum
Solyc07g042980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 56522939-56532938 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121368926 5263 Asterids Singleton cluster - no MSA
123750397 5271 Pentapetalae View MSA
122786735 5272 Eudicot View MSA
122049165 5273 Angiosperm View MSA
121344608 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain