Gene : Solyc07g043600.2 S. lycopersicum ITAG2.4
Defline:  (1 of 174) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7LWA0_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  1303 Name:  ? Solyc07g043600.2
Secondary Identifier:  ? PAC:36160724
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g043600.2 0.5kb upstream 0.5kb upstream 7713 true SL2.50ch07: 57548270-57555982 Solanum lycopersicum
Solyc07g043600.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 57548270-57548769 Solanum lycopersicum
Solyc07g043600.2 0.5kb downstream 0.5kb downstream 7713 true SL2.50ch07: 57548770-57556482 Solanum lycopersicum
Solyc07g043600.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 57555983-57556482 Solanum lycopersicum
Solyc07g043600.2 1.0kb upstream 1.0kb upstream 8213 true SL2.50ch07: 57547770-57555982 Solanum lycopersicum
Solyc07g043600.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 57547770-57548769 Solanum lycopersicum
Solyc07g043600.2 1.0kb downstream 1.0kb downstream 8213 true SL2.50ch07: 57548770-57556982 Solanum lycopersicum
Solyc07g043600.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 57555983-57556982 Solanum lycopersicum
Solyc07g043600.2 2.0kb upstream 2.0kb upstream 9213 true SL2.50ch07: 57546770-57555982 Solanum lycopersicum
Solyc07g043600.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 57546770-57548769 Solanum lycopersicum
Solyc07g043600.2 2.0kb downstream 2.0kb downstream 9213 true SL2.50ch07: 57548770-57557982 Solanum lycopersicum
Solyc07g043600.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 57555983-57557982 Solanum lycopersicum
Solyc07g043600.2 5.0kb upstream 5.0kb upstream 12213 true SL2.50ch07: 57543770-57555982 Solanum lycopersicum
Solyc07g043600.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 57543770-57548769 Solanum lycopersicum
Solyc07g043600.2 5.0kb downstream 5.0kb downstream 12213 true SL2.50ch07: 57548770-57560982 Solanum lycopersicum
Solyc07g043600.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 57555983-57560982 Solanum lycopersicum
Solyc07g043600.2 10.0kb upstream 10.0kb upstream 17213 true SL2.50ch07: 57538770-57555982 Solanum lycopersicum
Solyc07g043600.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 57538770-57548769 Solanum lycopersicum
Solyc07g043600.2 10.0kb downstream 10.0kb downstream 17213 true SL2.50ch07: 57548770-57565982 Solanum lycopersicum
Solyc07g043600.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 57555983-57565982 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469622 5263 Asterids View MSA
123741129 5271 Pentapetalae View MSA
122786104 5272 Eudicot View MSA
122045308 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346704 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain