Gene : Solyc07g041980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR32378:SF9 - KERATIN-ASSOCIATED PROTEIN 29-1 Description:  Seed length and weight protein long form for short seed (AHRD V1 *--- C6L699_ORYSI)
Genomic Order:  1149 Name:  ? Solyc07g041980.2
Secondary Identifier:  ? PAC:36160456
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g041980.2 0.5kb upstream 0.5kb upstream 4652 true SL2.50ch07: 54766337-54770988 Solanum lycopersicum
Solyc07g041980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 54770489-54770988 Solanum lycopersicum
Solyc07g041980.2 0.5kb downstream 0.5kb downstream 4652 true SL2.50ch07: 54765837-54770488 Solanum lycopersicum
Solyc07g041980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 54765837-54766336 Solanum lycopersicum
Solyc07g041980.2 1.0kb upstream 1.0kb upstream 5152 true SL2.50ch07: 54766337-54771488 Solanum lycopersicum
Solyc07g041980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 54770489-54771488 Solanum lycopersicum
Solyc07g041980.2 1.0kb downstream 1.0kb downstream 5152 true SL2.50ch07: 54765337-54770488 Solanum lycopersicum
Solyc07g041980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 54765337-54766336 Solanum lycopersicum
Solyc07g041980.2 2.0kb upstream 2.0kb upstream 6152 true SL2.50ch07: 54766337-54772488 Solanum lycopersicum
Solyc07g041980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 54770489-54772488 Solanum lycopersicum
Solyc07g041980.2 2.0kb downstream 2.0kb downstream 6152 true SL2.50ch07: 54764337-54770488 Solanum lycopersicum
Solyc07g041980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 54764337-54766336 Solanum lycopersicum
Solyc07g041980.2 5.0kb upstream 5.0kb upstream 9152 true SL2.50ch07: 54766337-54775488 Solanum lycopersicum
Solyc07g041980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 54770489-54775488 Solanum lycopersicum
Solyc07g041980.2 5.0kb downstream 5.0kb downstream 9152 true SL2.50ch07: 54761337-54770488 Solanum lycopersicum
Solyc07g041980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 54761337-54766336 Solanum lycopersicum
Solyc07g041980.2 10.0kb upstream 10.0kb upstream 14152 true SL2.50ch07: 54766337-54780488 Solanum lycopersicum
Solyc07g041980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 54770489-54780488 Solanum lycopersicum
Solyc07g041980.2 10.0kb downstream 10.0kb downstream 14152 true SL2.50ch07: 54756337-54770488 Solanum lycopersicum
Solyc07g041980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 54756337-54766336 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026325 5273 Angiosperm View MSA
121471211 5263 Asterids View MSA
123750452 5271 Pentapetalae View MSA
122787622 5272 Eudicot View MSA
121296281 5274 Embryophyte View MSA
123334475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain