Gene : Solyc07g041760.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K15082 - DNA repair protein RAD7 (RAD7) Description:  F-box/LRR-repeat protein 14 (AHRD V1 ***- B5X325_SALSA); contains Interpro domain(s) IPR006553 Leucine-rich repeat, cysteine-containing subtype
Genomic Order:  1128 Name:  ? Solyc07g041760.2
Secondary Identifier:  ? PAC:36160148
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g041760.2 0.5kb upstream 0.5kb upstream 5134 true SL2.50ch07: 54136855-54141988 Solanum lycopersicum
Solyc07g041760.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 54136855-54137354 Solanum lycopersicum
Solyc07g041760.2 0.5kb downstream 0.5kb downstream 5134 true SL2.50ch07: 54137355-54142488 Solanum lycopersicum
Solyc07g041760.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 54141989-54142488 Solanum lycopersicum
Solyc07g041760.2 1.0kb upstream 1.0kb upstream 5634 true SL2.50ch07: 54136355-54141988 Solanum lycopersicum
Solyc07g041760.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 54136355-54137354 Solanum lycopersicum
Solyc07g041760.2 1.0kb downstream 1.0kb downstream 5634 true SL2.50ch07: 54137355-54142988 Solanum lycopersicum
Solyc07g041760.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 54141989-54142988 Solanum lycopersicum
Solyc07g041760.2 2.0kb upstream 2.0kb upstream 6634 true SL2.50ch07: 54135355-54141988 Solanum lycopersicum
Solyc07g041760.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 54135355-54137354 Solanum lycopersicum
Solyc07g041760.2 2.0kb downstream 2.0kb downstream 6634 true SL2.50ch07: 54137355-54143988 Solanum lycopersicum
Solyc07g041760.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 54141989-54143988 Solanum lycopersicum
Solyc07g041760.2 5.0kb upstream 5.0kb upstream 9634 true SL2.50ch07: 54132355-54141988 Solanum lycopersicum
Solyc07g041760.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 54132355-54137354 Solanum lycopersicum
Solyc07g041760.2 5.0kb downstream 5.0kb downstream 9634 true SL2.50ch07: 54137355-54146988 Solanum lycopersicum
Solyc07g041760.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 54141989-54146988 Solanum lycopersicum
Solyc07g041760.2 10.0kb upstream 10.0kb upstream 14634 true SL2.50ch07: 54127355-54141988 Solanum lycopersicum
Solyc07g041760.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 54127355-54137354 Solanum lycopersicum
Solyc07g041760.2 10.0kb downstream 10.0kb downstream 14634 true SL2.50ch07: 54137355-54151988 Solanum lycopersicum
Solyc07g041760.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 54141989-54151988 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026954 5273 Angiosperm View MSA
121368723 5263 Asterids Singleton cluster - no MSA
123742710 5271 Pentapetalae View MSA
122770363 5272 Eudicot View MSA
121349520 5274 Embryophyte View MSA
123381344 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain