Gene : Solyc07g048120.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12555//PTHR12555:SF14 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 // SUBFAMILY NOT NAMED Description:  Ubiquitin fusion degradation protein 1 (AHRD V1 ***- C5FJE2_NANOT); contains Interpro domain(s) IPR004854 Ubiquitin fusion degradation protein UFD1
Genomic Order:  1453 Name:  ? Solyc07g048120.2
Secondary Identifier:  ? PAC:36161762
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g048120.2 0.5kb upstream 0.5kb upstream 7973 true SL2.50ch07: 59313380-59321352 Solanum lycopersicum
Solyc07g048120.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 59313380-59313879 Solanum lycopersicum
Solyc07g048120.2 0.5kb downstream 0.5kb downstream 7973 true SL2.50ch07: 59313880-59321852 Solanum lycopersicum
Solyc07g048120.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 59321353-59321852 Solanum lycopersicum
Solyc07g048120.2 1.0kb upstream 1.0kb upstream 8473 true SL2.50ch07: 59312880-59321352 Solanum lycopersicum
Solyc07g048120.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 59312880-59313879 Solanum lycopersicum
Solyc07g048120.2 1.0kb downstream 1.0kb downstream 8473 true SL2.50ch07: 59313880-59322352 Solanum lycopersicum
Solyc07g048120.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 59321353-59322352 Solanum lycopersicum
Solyc07g048120.2 2.0kb upstream 2.0kb upstream 9473 true SL2.50ch07: 59311880-59321352 Solanum lycopersicum
Solyc07g048120.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 59311880-59313879 Solanum lycopersicum
Solyc07g048120.2 2.0kb downstream 2.0kb downstream 9473 true SL2.50ch07: 59313880-59323352 Solanum lycopersicum
Solyc07g048120.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 59321353-59323352 Solanum lycopersicum
Solyc07g048120.2 5.0kb upstream 5.0kb upstream 12473 true SL2.50ch07: 59308880-59321352 Solanum lycopersicum
Solyc07g048120.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 59308880-59313879 Solanum lycopersicum
Solyc07g048120.2 5.0kb downstream 5.0kb downstream 12473 true SL2.50ch07: 59313880-59326352 Solanum lycopersicum
Solyc07g048120.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 59321353-59326352 Solanum lycopersicum
Solyc07g048120.2 10.0kb upstream 10.0kb upstream 17473 true SL2.50ch07: 59303880-59321352 Solanum lycopersicum
Solyc07g048120.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 59303880-59313879 Solanum lycopersicum
Solyc07g048120.2 10.0kb downstream 10.0kb downstream 17473 true SL2.50ch07: 59313880-59331352 Solanum lycopersicum
Solyc07g048120.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 59321353-59331352 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466660 5263 Asterids View MSA
123736611 5271 Pentapetalae View MSA
122787635 5272 Eudicot View MSA
122046586 5273 Angiosperm View MSA
121347183 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain