Gene : Solyc07g048060.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR23130:SF80 - AUXIN-INDUCED IN ROOT CULTURES PROTEIN 12 Description:  Auxin-induced protein-like (AHRD V1 **-- Q6YUI4_ORYSJ); contains Interpro domain(s) IPR007613 Protein of unknown function DUF568, DOMON-like
Genomic Order:  1447 Name:  ? Solyc07g048060.1
Secondary Identifier:  ? PAC:36160556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g048060.1 0.5kb upstream 0.5kb upstream 1016 true SL2.50ch07: 59239949-59240964 Solanum lycopersicum
Solyc07g048060.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 59239949-59240448 Solanum lycopersicum
Solyc07g048060.1 0.5kb downstream 0.5kb downstream 1016 true SL2.50ch07: 59240449-59241464 Solanum lycopersicum
Solyc07g048060.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 59240965-59241464 Solanum lycopersicum
Solyc07g048060.1 1.0kb upstream 1.0kb upstream 1516 true SL2.50ch07: 59239449-59240964 Solanum lycopersicum
Solyc07g048060.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 59239449-59240448 Solanum lycopersicum
Solyc07g048060.1 1.0kb downstream 1.0kb downstream 1516 true SL2.50ch07: 59240449-59241964 Solanum lycopersicum
Solyc07g048060.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 59240965-59241964 Solanum lycopersicum
Solyc07g048060.1 2.0kb upstream 2.0kb upstream 2516 true SL2.50ch07: 59238449-59240964 Solanum lycopersicum
Solyc07g048060.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 59238449-59240448 Solanum lycopersicum
Solyc07g048060.1 2.0kb downstream 2.0kb downstream 2516 true SL2.50ch07: 59240449-59242964 Solanum lycopersicum
Solyc07g048060.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 59240965-59242964 Solanum lycopersicum
Solyc07g048060.1 5.0kb upstream 5.0kb upstream 5516 true SL2.50ch07: 59235449-59240964 Solanum lycopersicum
Solyc07g048060.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 59235449-59240448 Solanum lycopersicum
Solyc07g048060.1 5.0kb downstream 5.0kb downstream 5516 true SL2.50ch07: 59240449-59245964 Solanum lycopersicum
Solyc07g048060.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 59240965-59245964 Solanum lycopersicum
Solyc07g048060.1 10.0kb upstream 10.0kb upstream 10516 true SL2.50ch07: 59230449-59240964 Solanum lycopersicum
Solyc07g048060.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 59230449-59240448 Solanum lycopersicum
Solyc07g048060.1 10.0kb downstream 10.0kb downstream 10516 true SL2.50ch07: 59240449-59250964 Solanum lycopersicum
Solyc07g048060.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 59240965-59250964 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480064 5263 Asterids View MSA
123742900 5271 Pentapetalae View MSA
122770434 5272 Eudicot View MSA
122050143 5273 Angiosperm View MSA
121311761 5274 Embryophyte View MSA
123349016 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain