Gene : Solyc07g048000.2 S. lycopersicum ITAG2.4
Defline:  (1 of 18) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Description:  Phototropic-responsive NPH3 (AHRD V1 **-- D9ZHC8_HYPPE); contains Interpro domain(s) IPR004249 NPH3
Genomic Order:  1441 Name:  ? Solyc07g048000.2
Secondary Identifier:  ? PAC:36160969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g048000.2 0.5kb upstream 0.5kb upstream 3531 true SL2.50ch07: 59203164-59206694 Solanum lycopersicum
Solyc07g048000.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 59203164-59203663 Solanum lycopersicum
Solyc07g048000.2 0.5kb downstream 0.5kb downstream 3531 true SL2.50ch07: 59203664-59207194 Solanum lycopersicum
Solyc07g048000.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 59206695-59207194 Solanum lycopersicum
Solyc07g048000.2 1.0kb upstream 1.0kb upstream 4031 true SL2.50ch07: 59202664-59206694 Solanum lycopersicum
Solyc07g048000.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 59202664-59203663 Solanum lycopersicum
Solyc07g048000.2 1.0kb downstream 1.0kb downstream 4031 true SL2.50ch07: 59203664-59207694 Solanum lycopersicum
Solyc07g048000.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 59206695-59207694 Solanum lycopersicum
Solyc07g048000.2 2.0kb upstream 2.0kb upstream 5031 true SL2.50ch07: 59201664-59206694 Solanum lycopersicum
Solyc07g048000.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 59201664-59203663 Solanum lycopersicum
Solyc07g048000.2 2.0kb downstream 2.0kb downstream 5031 true SL2.50ch07: 59203664-59208694 Solanum lycopersicum
Solyc07g048000.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 59206695-59208694 Solanum lycopersicum
Solyc07g048000.2 5.0kb upstream 5.0kb upstream 8031 true SL2.50ch07: 59198664-59206694 Solanum lycopersicum
Solyc07g048000.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 59198664-59203663 Solanum lycopersicum
Solyc07g048000.2 5.0kb downstream 5.0kb downstream 8031 true SL2.50ch07: 59203664-59211694 Solanum lycopersicum
Solyc07g048000.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 59206695-59211694 Solanum lycopersicum
Solyc07g048000.2 10.0kb upstream 10.0kb upstream 13031 true SL2.50ch07: 59193664-59206694 Solanum lycopersicum
Solyc07g048000.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 59193664-59203663 Solanum lycopersicum
Solyc07g048000.2 10.0kb downstream 10.0kb downstream 13031 true SL2.50ch07: 59203664-59216694 Solanum lycopersicum
Solyc07g048000.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 59206695-59216694 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466990 5263 Asterids View MSA
123736783 5271 Pentapetalae View MSA
122790175 5272 Eudicot View MSA
122044122 5273 Angiosperm View MSA
121348430 5274 Embryophyte View MSA
123380863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain