Gene : Solyc07g021620.1 S. lycopersicum ITAG2.4
Defline:  (1 of 6) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7LCN4_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  753 Name:  ? Solyc07g021620.1
Secondary Identifier:  ? PAC:36162077
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g021620.1 0.5kb upstream 0.5kb upstream 1901 true SL2.50ch07: 20367752-20369652 Solanum lycopersicum
Solyc07g021620.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 20367752-20368251 Solanum lycopersicum
Solyc07g021620.1 0.5kb downstream 0.5kb downstream 1901 true SL2.50ch07: 20368252-20370152 Solanum lycopersicum
Solyc07g021620.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 20369653-20370152 Solanum lycopersicum
Solyc07g021620.1 1.0kb upstream 1.0kb upstream 2401 true SL2.50ch07: 20367252-20369652 Solanum lycopersicum
Solyc07g021620.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 20367252-20368251 Solanum lycopersicum
Solyc07g021620.1 1.0kb downstream 1.0kb downstream 2401 true SL2.50ch07: 20368252-20370652 Solanum lycopersicum
Solyc07g021620.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 20369653-20370652 Solanum lycopersicum
Solyc07g021620.1 2.0kb upstream 2.0kb upstream 3401 true SL2.50ch07: 20366252-20369652 Solanum lycopersicum
Solyc07g021620.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 20366252-20368251 Solanum lycopersicum
Solyc07g021620.1 2.0kb downstream 2.0kb downstream 3401 true SL2.50ch07: 20368252-20371652 Solanum lycopersicum
Solyc07g021620.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 20369653-20371652 Solanum lycopersicum
Solyc07g021620.1 5.0kb upstream 5.0kb upstream 6401 true SL2.50ch07: 20363252-20369652 Solanum lycopersicum
Solyc07g021620.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 20363252-20368251 Solanum lycopersicum
Solyc07g021620.1 5.0kb downstream 5.0kb downstream 6401 true SL2.50ch07: 20368252-20374652 Solanum lycopersicum
Solyc07g021620.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 20369653-20374652 Solanum lycopersicum
Solyc07g021620.1 10.0kb upstream 10.0kb upstream 11401 true SL2.50ch07: 20358252-20369652 Solanum lycopersicum
Solyc07g021620.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 20358252-20368251 Solanum lycopersicum
Solyc07g021620.1 10.0kb downstream 10.0kb downstream 11401 true SL2.50ch07: 20368252-20379652 Solanum lycopersicum
Solyc07g021620.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 20369653-20379652 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480500 5263 Asterids View MSA
123750280 5271 Pentapetalae View MSA
122796437 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain