Protein Family : KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 121480500

Method ID:  5263 Method Name:  Asterids
Sequence Alignment:  View MSA Member Count:  11

11 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Migut.B00342 (1 of 2) PF13041//PF14432 - PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) M. guttatus v2.0 2085   scaffold_2: 1593526-1595610
DCAR_019926 (1 of 2) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) D. carota v2.0 2073   DCARv2_Chr6: 35638801-35640873
Solyc01g108180.2 (1 of 6) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) S. lycopersicum ITAG2.4 2210   SL2.50ch01: 95550587-95552796
Solyc07g021620.1 (1 of 6) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) S. lycopersicum ITAG2.4 1401   SL2.50ch07: 20368252-20369652
PGSC0003DMG400045146 (1 of 5) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) S. tuberosum v4.03 1401   ST4.03ch04: 13555433-13556833
PGSC0003DMG402024352 (1 of 5) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) S. tuberosum v4.03 1401   ST4.03ch04: 13555433-13556833
PGSC0003DMG400025794 (1 of 5) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) S. tuberosum v4.03 1911   ST4.03ch01: 84596664-84598574
Lsat_1_v5_gn_5_145720 (1 of 6) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) L. sativa V8 1477   Lsat_1_v8_lg_5: 274853320-274854796
Lsat_1_v5_gn_9_110101 (1 of 3) KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) L. sativa V8 3134   Lsat_1_v8_lg_9: 178201466-178204599
HanXRQChr03g0072331 (1 of 1) PF00450//PF01535//PF14432 - Serine carboxypeptidase (Peptidase_S10) // PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) H. annuus r1.2 3485   HanXRQChr03: 83747970-83751454
HanXRQChr12g0354711 (1 of 5) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) H. annuus r1.2 1311   HanXRQChr12: 1512169-1513479

11 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Migut.B00342.1.p M. guttatus v2.0 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 1 5263 Asterids
DCAR_019926 D. carota v2.0 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 1 5263 Asterids
Solyc01g108180.2.1 S. lycopersicum ITAG2.4 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 2 5263 Asterids
Solyc07g021620.1.1 S. lycopersicum ITAG2.4 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 2 5263 Asterids
PGSC0003DMP400067250 S. tuberosum v4.03 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 3 5263 Asterids
PGSC0003DMP400042141 S. tuberosum v4.03 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 3 5263 Asterids
Lsat_1_v5_gn_9_110101.1 L. sativa V8 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 2 5263 Asterids
Lsat_1_v5_gn_5_145720.1 L. sativa V8 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 2 5263 Asterids
HanXRQChr12g0354711 H. annuus r1.2 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 2 5263 Asterids
HanXRQChr03g0072331 H. annuus r1.2 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 2 5263 Asterids
PGSC0003DMP400044712 S. tuberosum v4.03 121480500 KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) 3 5263 Asterids