Gene : Lsat_1_v5_gn_9_110101 L. sativa V8
Defline:  (1 of 3) KOG1142 - Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) Genomic Order:  3456
Name:  ? Lsat_1_v5_gn_9_110101 Secondary Identifier:  ? PAC:38927179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_110101 0.5kb upstream 0.5kb upstream 3634   true Lsat_1_v8_lg_9: 178200966-178204599 Lactuca sativa
Lsat_1_v5_gn_9_110101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 178200966-178201465 Lactuca sativa
Lsat_1_v5_gn_9_110101 0.5kb downstream 0.5kb downstream 3634   true Lsat_1_v8_lg_9: 178201466-178205099 Lactuca sativa
Lsat_1_v5_gn_9_110101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 178204600-178205099 Lactuca sativa
Lsat_1_v5_gn_9_110101 1.0kb upstream 1.0kb upstream 4134   true Lsat_1_v8_lg_9: 178200466-178204599 Lactuca sativa
Lsat_1_v5_gn_9_110101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 178200466-178201465 Lactuca sativa
Lsat_1_v5_gn_9_110101 1.0kb downstream 1.0kb downstream 4134   true Lsat_1_v8_lg_9: 178201466-178205599 Lactuca sativa
Lsat_1_v5_gn_9_110101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 178204600-178205599 Lactuca sativa
Lsat_1_v5_gn_9_110101 2.0kb upstream 2.0kb upstream 5134   true Lsat_1_v8_lg_9: 178199466-178204599 Lactuca sativa
Lsat_1_v5_gn_9_110101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 178199466-178201465 Lactuca sativa
Lsat_1_v5_gn_9_110101 2.0kb downstream 2.0kb downstream 5134   true Lsat_1_v8_lg_9: 178201466-178206599 Lactuca sativa
Lsat_1_v5_gn_9_110101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 178204600-178206599 Lactuca sativa
Lsat_1_v5_gn_9_110101 5.0kb upstream 5.0kb upstream 8134   true Lsat_1_v8_lg_9: 178196466-178204599 Lactuca sativa
Lsat_1_v5_gn_9_110101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 178196466-178201465 Lactuca sativa
Lsat_1_v5_gn_9_110101 5.0kb downstream 5.0kb downstream 8134   true Lsat_1_v8_lg_9: 178201466-178209599 Lactuca sativa
Lsat_1_v5_gn_9_110101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 178204600-178209599 Lactuca sativa
Lsat_1_v5_gn_9_110101 10.0kb upstream 10.0kb upstream 13134   true Lsat_1_v8_lg_9: 178191466-178204599 Lactuca sativa
Lsat_1_v5_gn_9_110101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 178191466-178201465 Lactuca sativa
Lsat_1_v5_gn_9_110101 10.0kb downstream 10.0kb downstream 13134   true Lsat_1_v8_lg_9: 178201466-178214599 Lactuca sativa
Lsat_1_v5_gn_9_110101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 178204600-178214599 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480500 5263 Asterids View MSA
123750280 5271 Pentapetalae View MSA
122796437 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain