Gene : Lsat_1_v5_gn_5_145720 L. sativa V8
Defline:  (1 of 6) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  3873
Name:  ? Lsat_1_v5_gn_5_145720 Secondary Identifier:  ? PAC:38967089
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_145720 0.5kb upstream 0.5kb upstream 1977   true Lsat_1_v8_lg_5: 274852820-274854796 Lactuca sativa
Lsat_1_v5_gn_5_145720 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 274852820-274853319 Lactuca sativa
Lsat_1_v5_gn_5_145720 0.5kb downstream 0.5kb downstream 1977   true Lsat_1_v8_lg_5: 274853320-274855296 Lactuca sativa
Lsat_1_v5_gn_5_145720 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 274854797-274855296 Lactuca sativa
Lsat_1_v5_gn_5_145720 1.0kb upstream 1.0kb upstream 2477   true Lsat_1_v8_lg_5: 274852320-274854796 Lactuca sativa
Lsat_1_v5_gn_5_145720 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 274852320-274853319 Lactuca sativa
Lsat_1_v5_gn_5_145720 1.0kb downstream 1.0kb downstream 2477   true Lsat_1_v8_lg_5: 274853320-274855796 Lactuca sativa
Lsat_1_v5_gn_5_145720 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 274854797-274855796 Lactuca sativa
Lsat_1_v5_gn_5_145720 2.0kb upstream 2.0kb upstream 3477   true Lsat_1_v8_lg_5: 274851320-274854796 Lactuca sativa
Lsat_1_v5_gn_5_145720 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 274851320-274853319 Lactuca sativa
Lsat_1_v5_gn_5_145720 2.0kb downstream 2.0kb downstream 3477   true Lsat_1_v8_lg_5: 274853320-274856796 Lactuca sativa
Lsat_1_v5_gn_5_145720 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 274854797-274856796 Lactuca sativa
Lsat_1_v5_gn_5_145720 5.0kb upstream 5.0kb upstream 6477   true Lsat_1_v8_lg_5: 274848320-274854796 Lactuca sativa
Lsat_1_v5_gn_5_145720 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 274848320-274853319 Lactuca sativa
Lsat_1_v5_gn_5_145720 5.0kb downstream 5.0kb downstream 6477   true Lsat_1_v8_lg_5: 274853320-274859796 Lactuca sativa
Lsat_1_v5_gn_5_145720 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 274854797-274859796 Lactuca sativa
Lsat_1_v5_gn_5_145720 10.0kb upstream 10.0kb upstream 11477   true Lsat_1_v8_lg_5: 274843320-274854796 Lactuca sativa
Lsat_1_v5_gn_5_145720 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 274843320-274853319 Lactuca sativa
Lsat_1_v5_gn_5_145720 10.0kb downstream 10.0kb downstream 11477   true Lsat_1_v8_lg_5: 274853320-274864796 Lactuca sativa
Lsat_1_v5_gn_5_145720 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 274854797-274864796 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480500 5263 Asterids View MSA
123750280 5271 Pentapetalae View MSA
122796437 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain