Gene : Solyc03g034240.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) 5.3.99.9 - Neoxanthin synthase / NSY Description:  Chromosome 18 contig 1 DNA sequence (AHRD V1 *-*- Q00SF3_OSTTA)
Genomic Order:  617 Name:  ? Solyc03g034240.2
Secondary Identifier:  ? PAC:36135977
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6809 Solanum lycopersicum pathologic  
Slycopersicum PWY-695 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g034240.2 0.5kb upstream 0.5kb upstream 5266 true SL2.50ch03: 5928890-5934155 Solanum lycopersicum
Solyc03g034240.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 5933656-5934155 Solanum lycopersicum
Solyc03g034240.2 0.5kb downstream 0.5kb downstream 5266 true SL2.50ch03: 5928390-5933655 Solanum lycopersicum
Solyc03g034240.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 5928390-5928889 Solanum lycopersicum
Solyc03g034240.2 1.0kb upstream 1.0kb upstream 5766 true SL2.50ch03: 5928890-5934655 Solanum lycopersicum
Solyc03g034240.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 5933656-5934655 Solanum lycopersicum
Solyc03g034240.2 1.0kb downstream 1.0kb downstream 5766 true SL2.50ch03: 5927890-5933655 Solanum lycopersicum
Solyc03g034240.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 5927890-5928889 Solanum lycopersicum
Solyc03g034240.2 2.0kb upstream 2.0kb upstream 6766 true SL2.50ch03: 5928890-5935655 Solanum lycopersicum
Solyc03g034240.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 5933656-5935655 Solanum lycopersicum
Solyc03g034240.2 2.0kb downstream 2.0kb downstream 6766 true SL2.50ch03: 5926890-5933655 Solanum lycopersicum
Solyc03g034240.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 5926890-5928889 Solanum lycopersicum
Solyc03g034240.2 5.0kb upstream 5.0kb upstream 9766 true SL2.50ch03: 5928890-5938655 Solanum lycopersicum
Solyc03g034240.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 5933656-5938655 Solanum lycopersicum
Solyc03g034240.2 5.0kb downstream 5.0kb downstream 9766 true SL2.50ch03: 5923890-5933655 Solanum lycopersicum
Solyc03g034240.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 5923890-5928889 Solanum lycopersicum
Solyc03g034240.2 10.0kb upstream 10.0kb upstream 14766 true SL2.50ch03: 5928890-5943655 Solanum lycopersicum
Solyc03g034240.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 5933656-5943655 Solanum lycopersicum
Solyc03g034240.2 10.0kb downstream 10.0kb downstream 14766 true SL2.50ch03: 5918890-5933655 Solanum lycopersicum
Solyc03g034240.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 5918890-5928889 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121712583 5273 Angiosperm View MSA
121388599 5263 Asterids View MSA
123669180 5271 Pentapetalae View MSA
122703072 5272 Eudicot View MSA
120984304 5274 Embryophyte View MSA
123425802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain