Gene : Solyc03g033450.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22807:SF16 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN Description:  Ribosomal RNA small subunit methyltransferase B (AHRD V1 *-*- D4UN00_RUMAL); contains Interpro domain(s) IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
Genomic Order:  538 Name:  ? Solyc03g033450.2
Secondary Identifier:  ? PAC:36136653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g033450.2 0.5kb upstream 0.5kb upstream 8289 true SL2.50ch03: 5003241-5011529 Solanum lycopersicum
Solyc03g033450.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 5003241-5003740 Solanum lycopersicum
Solyc03g033450.2 0.5kb downstream 0.5kb downstream 8289 true SL2.50ch03: 5003741-5012029 Solanum lycopersicum
Solyc03g033450.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 5011530-5012029 Solanum lycopersicum
Solyc03g033450.2 1.0kb upstream 1.0kb upstream 8789 true SL2.50ch03: 5002741-5011529 Solanum lycopersicum
Solyc03g033450.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 5002741-5003740 Solanum lycopersicum
Solyc03g033450.2 1.0kb downstream 1.0kb downstream 8789 true SL2.50ch03: 5003741-5012529 Solanum lycopersicum
Solyc03g033450.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 5011530-5012529 Solanum lycopersicum
Solyc03g033450.2 2.0kb upstream 2.0kb upstream 9789 true SL2.50ch03: 5001741-5011529 Solanum lycopersicum
Solyc03g033450.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 5001741-5003740 Solanum lycopersicum
Solyc03g033450.2 2.0kb downstream 2.0kb downstream 9789 true SL2.50ch03: 5003741-5013529 Solanum lycopersicum
Solyc03g033450.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 5011530-5013529 Solanum lycopersicum
Solyc03g033450.2 5.0kb upstream 5.0kb upstream 12789 true SL2.50ch03: 4998741-5011529 Solanum lycopersicum
Solyc03g033450.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 4998741-5003740 Solanum lycopersicum
Solyc03g033450.2 5.0kb downstream 5.0kb downstream 12789 true SL2.50ch03: 5003741-5016529 Solanum lycopersicum
Solyc03g033450.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 5011530-5016529 Solanum lycopersicum
Solyc03g033450.2 10.0kb upstream 10.0kb upstream 17789 true SL2.50ch03: 4993741-5011529 Solanum lycopersicum
Solyc03g033450.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 4993741-5003740 Solanum lycopersicum
Solyc03g033450.2 10.0kb downstream 10.0kb downstream 17789 true SL2.50ch03: 5003741-5021529 Solanum lycopersicum
Solyc03g033450.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 5011530-5021529 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468763 5263 Asterids View MSA
123737696 5271 Pentapetalae View MSA
122785944 5272 Eudicot View MSA
122044592 5273 Angiosperm View MSA
121346334 5274 Embryophyte View MSA
123425870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain