Gene : Solyc03g031860.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase Description:  Phytoene synthase 1
Genomic Order:  478 Name:  ? Solyc03g031860.2
Secondary Identifier:  ? PAC:36136342
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum CAROTENOID-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-6475 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g031860.2 0.5kb upstream 0.5kb upstream 4494 true SL2.50ch03: 4325634-4330127 Solanum lycopersicum
Solyc03g031860.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 4325634-4326133 Solanum lycopersicum
Solyc03g031860.2 0.5kb downstream 0.5kb downstream 4494 true SL2.50ch03: 4326134-4330627 Solanum lycopersicum
Solyc03g031860.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 4330128-4330627 Solanum lycopersicum
Solyc03g031860.2 1.0kb upstream 1.0kb upstream 4994 true SL2.50ch03: 4325134-4330127 Solanum lycopersicum
Solyc03g031860.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 4325134-4326133 Solanum lycopersicum
Solyc03g031860.2 1.0kb downstream 1.0kb downstream 4994 true SL2.50ch03: 4326134-4331127 Solanum lycopersicum
Solyc03g031860.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 4330128-4331127 Solanum lycopersicum
Solyc03g031860.2 2.0kb upstream 2.0kb upstream 5994 true SL2.50ch03: 4324134-4330127 Solanum lycopersicum
Solyc03g031860.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 4324134-4326133 Solanum lycopersicum
Solyc03g031860.2 2.0kb downstream 2.0kb downstream 5994 true SL2.50ch03: 4326134-4332127 Solanum lycopersicum
Solyc03g031860.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 4330128-4332127 Solanum lycopersicum
Solyc03g031860.2 5.0kb upstream 5.0kb upstream 8994 true SL2.50ch03: 4321134-4330127 Solanum lycopersicum
Solyc03g031860.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 4321134-4326133 Solanum lycopersicum
Solyc03g031860.2 5.0kb downstream 5.0kb downstream 8994 true SL2.50ch03: 4326134-4335127 Solanum lycopersicum
Solyc03g031860.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 4330128-4335127 Solanum lycopersicum
Solyc03g031860.2 10.0kb upstream 10.0kb upstream 13994 true SL2.50ch03: 4316134-4330127 Solanum lycopersicum
Solyc03g031860.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 4316134-4326133 Solanum lycopersicum
Solyc03g031860.2 10.0kb downstream 10.0kb downstream 13994 true SL2.50ch03: 4326134-4340127 Solanum lycopersicum
Solyc03g031860.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 4330128-4340127 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
121480791 5263 Asterids View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain