Gene : Solyc03g007370.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Description:  RNA polymerase sigma factor (AHRD V1 *-** C7QR23_CYAP0); contains Interpro domain(s) IPR013325 RNA polymerase sigma factor, region 2
Genomic Order:  238 Name:  ? Solyc03g007370.2
Secondary Identifier:  ? PAC:36135102
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g007370.2 0.5kb upstream 0.5kb upstream 4801 true SL2.50ch03: 1915174-1919974 Solanum lycopersicum
Solyc03g007370.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 1919475-1919974 Solanum lycopersicum
Solyc03g007370.2 0.5kb downstream 0.5kb downstream 4801 true SL2.50ch03: 1914674-1919474 Solanum lycopersicum
Solyc03g007370.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 1914674-1915173 Solanum lycopersicum
Solyc03g007370.2 1.0kb upstream 1.0kb upstream 5301 true SL2.50ch03: 1915174-1920474 Solanum lycopersicum
Solyc03g007370.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 1919475-1920474 Solanum lycopersicum
Solyc03g007370.2 1.0kb downstream 1.0kb downstream 5301 true SL2.50ch03: 1914174-1919474 Solanum lycopersicum
Solyc03g007370.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 1914174-1915173 Solanum lycopersicum
Solyc03g007370.2 2.0kb upstream 2.0kb upstream 6301 true SL2.50ch03: 1915174-1921474 Solanum lycopersicum
Solyc03g007370.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 1919475-1921474 Solanum lycopersicum
Solyc03g007370.2 2.0kb downstream 2.0kb downstream 6301 true SL2.50ch03: 1913174-1919474 Solanum lycopersicum
Solyc03g007370.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 1913174-1915173 Solanum lycopersicum
Solyc03g007370.2 5.0kb upstream 5.0kb upstream 9301 true SL2.50ch03: 1915174-1924474 Solanum lycopersicum
Solyc03g007370.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 1919475-1924474 Solanum lycopersicum
Solyc03g007370.2 5.0kb downstream 5.0kb downstream 9301 true SL2.50ch03: 1910174-1919474 Solanum lycopersicum
Solyc03g007370.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 1910174-1915173 Solanum lycopersicum
Solyc03g007370.2 10.0kb upstream 10.0kb upstream 14301 true SL2.50ch03: 1915174-1929474 Solanum lycopersicum
Solyc03g007370.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 1919475-1929474 Solanum lycopersicum
Solyc03g007370.2 10.0kb downstream 10.0kb downstream 14301 true SL2.50ch03: 1905174-1919474 Solanum lycopersicum
Solyc03g007370.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 1905174-1915173 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026363 5273 Angiosperm View MSA
121474704 5263 Asterids View MSA
123740689 5271 Pentapetalae View MSA
122788659 5272 Eudicot View MSA
121349199 5274 Embryophyte View MSA
123381214 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain