Protein Family : sigma factor E 123381214

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  78
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78 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
53596 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL S. moellendorffii v1.0 1233   scaffold_35: 1393629-1394861
30169.t000309 (1 of 1) PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL R. communis v0.1 2731   30169: 1733116-1735846
Cucsa.012950 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL C. sativus v1.0 4215   scaffold00164: 733776-737990
orange1.1g010092m.g (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL C. sinensis v1.1 4184   scaffold00104: 274203-278386
AT5G24120 (1 of 1) PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL A. thaliana TAIR10 SIGE 2679   Chr5: 8157551-8160229
Thhalv10004166m.g (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL E. salsugineum v1.0 2906   scaffold_6: 3081817-3084722
Ciclev10004760m.g (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL C. clementina v1.0 4159   scaffold_9: 30040457-30044615
Gorai.008G270500 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL G. raimondii v2.1 3489   Chr08: 54948050-54951538
Thecc1EG015349 (1 of 1) PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL T. cacao v1.1 4439   scaffold_3: 27479806-27484244
Migut.F00241 (1 of 2) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL M. guttatus v2.0 2714   scaffold_6: 1135617-1138330
Migut.F01049 (1 of 2) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL M. guttatus v2.0 2730   scaffold_6: 5054659-5057388
Araha.11104s0003 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL A. halleri v1.1 2777   Scaffold11104: 9347-12123
Cagra.8922s0001 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL C. grandiflora v1.1 2666   Scaffold8922: 2-2667
Glyma.06G125700 (1 of 4) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL G. max Wm82.a2.v1 3577   Chr06: 10255309-10258885
Glyma.13G041200 (1 of 4) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL G. max Wm82.a2.v1 6399   Chr13: 13162176-13168574
Glyma.14G160600 (1 of 4) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL G. max Wm82.a2.v1 5227   Chr14: 37369097-37374323
Glyma.04G238200 (1 of 4) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL G. max Wm82.a2.v1 2840   Chr04: 50676984-50679823
Brara.F02635 (1 of 2) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL B. rapa FPsc v1.3 2538   A06: 21799788-21802325
Brara.I00582 (1 of 2) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL B. rapa FPsc v1.3 3347   A09: 3263992-3267338
Bostr.10199s0021 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL B. stricta v1.2 2827   Scaffold10199: 172803-175629
Medtr3g090900 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL M. truncatula Mt4.0v1 5207   chr3: 41274049-41279255
SapurV1A.0377s0060 (1 of 2) K03093 - RNA polymerase sigma factor (SIGMA70) S. purpurea v1.0 3802   chr12: 1563322-1567123
SapurV1A.1227s0040 (1 of 3) PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL S. purpurea v1.0 4084   Scaffold1227: 43882-47965
SapurV1A.4845s0010 (1 of 3) PTHR30603//PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL S. purpurea v1.0 4079   Scaffold4845: 2577-6655
Traes_1AL_0C41C44B1 (1 of 4) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL T. aestivum v2.2 1671   ta_iwgsc_1al_v2_3847553: 2211-3881
Eucgr.A02665 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL E. grandis v2.0 6338   Chr01: 41913307-41919644
Prupe.2G307500 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL P. persica v2.1 3835   Pp02: 29216095-29219929
GSMUA_Achr7G24590_001 (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL M. acuminata v1 3790   chr7: 26534513-26538302
Manes.06G157400 (1 of 2) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL M. esculenta v6.1 2986   Chromosome06: 25928357-25931342
Manes.14G018500 (1 of 2) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL M. esculenta v6.1 4147   Chromosome14: 1730454-1734600

78 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
53596 S. moellendorffii v1.0 123381214 sigma factor E 1 5275 Viridiplantae
30169.m006532 R. communis v0.1 123381214 sigma factor E 1 5275 Viridiplantae
Cucsa.012950.1 C. sativus v1.0 123381214 sigma factor E 1 5275 Viridiplantae
orange1.1g010092m C. sinensis v1.1 123381214 sigma factor E 1 5275 Viridiplantae
AT5G24120.1 A. thaliana TAIR10 123381214 sigma factor E 1 5275 Viridiplantae
Thhalv10004166m E. salsugineum v1.0 123381214 sigma factor E 1 5275 Viridiplantae
Ciclev10004760m C. clementina v1.0 123381214 sigma factor E 1 5275 Viridiplantae
Gorai.008G270500.1 G. raimondii v2.1 123381214 sigma factor E 1 5275 Viridiplantae
Thecc1EG015349t1 T. cacao v1.1 123381214 sigma factor E 1 5275 Viridiplantae
Migut.F00241.1.p M. guttatus v2.0 123381214 sigma factor E 2 5275 Viridiplantae
Migut.F01049.1.p M. guttatus v2.0 123381214 sigma factor E 2 5275 Viridiplantae
Araha.11104s0003.1.p A. halleri v1.1 123381214 sigma factor E 1 5275 Viridiplantae
Cagra.8922s0001.1.p C. grandiflora v1.1 123381214 sigma factor E 1 5275 Viridiplantae
Glyma.14G160600.1.p G. max Wm82.a2.v1 123381214 sigma factor E 4 5275 Viridiplantae
Glyma.06G125700.1.p G. max Wm82.a2.v1 123381214 sigma factor E 4 5275 Viridiplantae
Glyma.13G041200.1.p G. max Wm82.a2.v1 123381214 sigma factor E 4 5275 Viridiplantae
Glyma.04G238200.1.p G. max Wm82.a2.v1 123381214 sigma factor E 4 5275 Viridiplantae
Brara.I00582.1.p B. rapa FPsc v1.3 123381214 sigma factor E 2 5275 Viridiplantae
Brara.F02635.1.p B. rapa FPsc v1.3 123381214 sigma factor E 2 5275 Viridiplantae
Bostr.10199s0021.1.p B. stricta v1.2 123381214 sigma factor E 1 5275 Viridiplantae
Medtr3g090900.1 M. truncatula Mt4.0v1 123381214 sigma factor E 1 5275 Viridiplantae
SapurV1A.0377s0060.1.p S. purpurea v1.0 123381214 sigma factor E 3 5275 Viridiplantae
SapurV1A.1227s0040.1.p S. purpurea v1.0 123381214 sigma factor E 3 5275 Viridiplantae
SapurV1A.4845s0010.1.p S. purpurea v1.0 123381214 sigma factor E 3 5275 Viridiplantae
Traes_1AL_0C41C44B1.1 T. aestivum v2.2 123381214 sigma factor E 1 5275 Viridiplantae
Eucgr.A02665.1.p E. grandis v2.0 123381214 sigma factor E 1 5275 Viridiplantae
Prupe.2G307500.1.p P. persica v2.1 123381214 sigma factor E 1 5275 Viridiplantae
GSMUA_Achr7P24590_001 M. acuminata v1 123381214 sigma factor E 1 5275 Viridiplantae
Manes.06G157400.1.p M. esculenta v6.1 123381214 sigma factor E 2 5275 Viridiplantae
Manes.14G018500.1.p M. esculenta v6.1 123381214 sigma factor E 2 5275 Viridiplantae