Gene : Solyc07g064110.2 S. lycopersicum ITAG2.4
Defline:  (1 of 174) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7MEM9_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  2240 Name:  ? Solyc07g064110.2
Secondary Identifier:  ? PAC:36160578
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g064110.2 0.5kb upstream 0.5kb upstream 12604 true SL2.50ch07: 66382520-66395123 Solanum lycopersicum
Solyc07g064110.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 66394624-66395123 Solanum lycopersicum
Solyc07g064110.2 0.5kb downstream 0.5kb downstream 12604 true SL2.50ch07: 66382020-66394623 Solanum lycopersicum
Solyc07g064110.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 66382020-66382519 Solanum lycopersicum
Solyc07g064110.2 1.0kb upstream 1.0kb upstream 13104 true SL2.50ch07: 66382520-66395623 Solanum lycopersicum
Solyc07g064110.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 66394624-66395623 Solanum lycopersicum
Solyc07g064110.2 1.0kb downstream 1.0kb downstream 13104 true SL2.50ch07: 66381520-66394623 Solanum lycopersicum
Solyc07g064110.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 66381520-66382519 Solanum lycopersicum
Solyc07g064110.2 2.0kb upstream 2.0kb upstream 14104 true SL2.50ch07: 66382520-66396623 Solanum lycopersicum
Solyc07g064110.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 66394624-66396623 Solanum lycopersicum
Solyc07g064110.2 2.0kb downstream 2.0kb downstream 14104 true SL2.50ch07: 66380520-66394623 Solanum lycopersicum
Solyc07g064110.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 66380520-66382519 Solanum lycopersicum
Solyc07g064110.2 5.0kb upstream 5.0kb upstream 17104 true SL2.50ch07: 66382520-66399623 Solanum lycopersicum
Solyc07g064110.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 66394624-66399623 Solanum lycopersicum
Solyc07g064110.2 5.0kb downstream 5.0kb downstream 17104 true SL2.50ch07: 66377520-66394623 Solanum lycopersicum
Solyc07g064110.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 66377520-66382519 Solanum lycopersicum
Solyc07g064110.2 10.0kb upstream 10.0kb upstream 22104 true SL2.50ch07: 66382520-66404623 Solanum lycopersicum
Solyc07g064110.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 66394624-66404623 Solanum lycopersicum
Solyc07g064110.2 10.0kb downstream 10.0kb downstream 22104 true SL2.50ch07: 66372520-66394623 Solanum lycopersicum
Solyc07g064110.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 66372520-66382519 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470325 5263 Asterids View MSA
123738469 5271 Pentapetalae View MSA
122788721 5272 Eudicot View MSA
122045808 5273 Angiosperm View MSA
121347981 5274 Embryophyte View MSA
123380700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain