Gene : Solyc07g066390.1 S. lycopersicum ITAG2.4
Defline:  (1 of 420) PF13041 - PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KVY0_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  2465 Name:  ? Solyc07g066390.1
Secondary Identifier:  ? PAC:36161862
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g066390.1 0.5kb upstream 0.5kb upstream 2234 true SL2.50ch07: 67835724-67837957 Solanum lycopersicum
Solyc07g066390.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 67837458-67837957 Solanum lycopersicum
Solyc07g066390.1 0.5kb downstream 0.5kb downstream 2234 true SL2.50ch07: 67835224-67837457 Solanum lycopersicum
Solyc07g066390.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 67835224-67835723 Solanum lycopersicum
Solyc07g066390.1 1.0kb upstream 1.0kb upstream 2734 true SL2.50ch07: 67835724-67838457 Solanum lycopersicum
Solyc07g066390.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 67837458-67838457 Solanum lycopersicum
Solyc07g066390.1 1.0kb downstream 1.0kb downstream 2734 true SL2.50ch07: 67834724-67837457 Solanum lycopersicum
Solyc07g066390.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 67834724-67835723 Solanum lycopersicum
Solyc07g066390.1 2.0kb upstream 2.0kb upstream 3734 true SL2.50ch07: 67835724-67839457 Solanum lycopersicum
Solyc07g066390.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 67837458-67839457 Solanum lycopersicum
Solyc07g066390.1 2.0kb downstream 2.0kb downstream 3734 true SL2.50ch07: 67833724-67837457 Solanum lycopersicum
Solyc07g066390.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 67833724-67835723 Solanum lycopersicum
Solyc07g066390.1 5.0kb upstream 5.0kb upstream 6734 true SL2.50ch07: 67835724-67842457 Solanum lycopersicum
Solyc07g066390.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 67837458-67842457 Solanum lycopersicum
Solyc07g066390.1 5.0kb downstream 5.0kb downstream 6734 true SL2.50ch07: 67830724-67837457 Solanum lycopersicum
Solyc07g066390.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 67830724-67835723 Solanum lycopersicum
Solyc07g066390.1 10.0kb upstream 10.0kb upstream 11734 true SL2.50ch07: 67835724-67847457 Solanum lycopersicum
Solyc07g066390.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 67837458-67847457 Solanum lycopersicum
Solyc07g066390.1 10.0kb downstream 10.0kb downstream 11734 true SL2.50ch07: 67825724-67837457 Solanum lycopersicum
Solyc07g066390.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 67825724-67835723 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466170 5263 Asterids View MSA
123736367 5271 Pentapetalae View MSA
122787687 5272 Eudicot View MSA
122046789 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310659 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain