Gene : Solyc07g066610.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11406:SF8 - PHOSPHOGLYCERATE KINASE 1, CHLOROPLASTIC-RELATED Description:  Phosphoglycerate kinase (AHRD V1 ***- O81394_SOLTU); contains Interpro domain(s) IPR001576 Phosphoglycerate kinase
Genomic Order:  2486 Name:  ? Solyc07g066610.2
Secondary Identifier:  ? PAC:36160716
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum ANAEROFRUCAT-PWY Solanum lycopersicum pathologic  
Slycopersicum ANAGLYCOLYSIS-PWY Solanum lycopersicum pathologic  
Slycopersicum CALVIN-PWY Solanum lycopersicum pathologic  
Slycopersicum GLUCONEO-PWY Solanum lycopersicum pathologic  
Slycopersicum PHOTOALL-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-1042 Solanum lycopersicum pathologic  
Slycopersicum PWY-5464 Solanum lycopersicum pathologic  
Slycopersicum SUCSYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g066610.2 0.5kb upstream 0.5kb upstream 2969 true SL2.50ch07: 67986192-67989160 Solanum lycopersicum
Solyc07g066610.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 67988661-67989160 Solanum lycopersicum
Solyc07g066610.2 0.5kb downstream 0.5kb downstream 2969 true SL2.50ch07: 67985692-67988660 Solanum lycopersicum
Solyc07g066610.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 67985692-67986191 Solanum lycopersicum
Solyc07g066610.2 1.0kb upstream 1.0kb upstream 3469 true SL2.50ch07: 67986192-67989660 Solanum lycopersicum
Solyc07g066610.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 67988661-67989660 Solanum lycopersicum
Solyc07g066610.2 1.0kb downstream 1.0kb downstream 3469 true SL2.50ch07: 67985192-67988660 Solanum lycopersicum
Solyc07g066610.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 67985192-67986191 Solanum lycopersicum
Solyc07g066610.2 2.0kb upstream 2.0kb upstream 4469 true SL2.50ch07: 67986192-67990660 Solanum lycopersicum
Solyc07g066610.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 67988661-67990660 Solanum lycopersicum
Solyc07g066610.2 2.0kb downstream 2.0kb downstream 4469 true SL2.50ch07: 67984192-67988660 Solanum lycopersicum
Solyc07g066610.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 67984192-67986191 Solanum lycopersicum
Solyc07g066610.2 5.0kb upstream 5.0kb upstream 7469 true SL2.50ch07: 67986192-67993660 Solanum lycopersicum
Solyc07g066610.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 67988661-67993660 Solanum lycopersicum
Solyc07g066610.2 5.0kb downstream 5.0kb downstream 7469 true SL2.50ch07: 67981192-67988660 Solanum lycopersicum
Solyc07g066610.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 67981192-67986191 Solanum lycopersicum
Solyc07g066610.2 10.0kb upstream 10.0kb upstream 12469 true SL2.50ch07: 67986192-67998660 Solanum lycopersicum
Solyc07g066610.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 67988661-67998660 Solanum lycopersicum
Solyc07g066610.2 10.0kb downstream 10.0kb downstream 12469 true SL2.50ch07: 67976192-67988660 Solanum lycopersicum
Solyc07g066610.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 67976192-67986191 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470404 5263 Asterids View MSA
123738509 5271 Pentapetalae View MSA
122793227 5272 Eudicot View MSA
122042825 5273 Angiosperm View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain