Gene : Solyc03g112950.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11139:SF72 - SERINE-PROTEIN KINASE ATM Description:  Serine/threonine-protein kinase (AHRD V1 ***- D2V0W7_NAEGR); contains Interpro domain(s) IPR015519 Ataxia-Telangiectasia Mutated
Genomic Order:  2340 Name:  ? Solyc03g112950.2
Secondary Identifier:  ? PAC:36135125
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g112950.2 0.5kb upstream 0.5kb upstream 31898 true SL2.50ch03: 63255827-63287724 Solanum lycopersicum
Solyc03g112950.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 63255827-63256326 Solanum lycopersicum
Solyc03g112950.2 0.5kb downstream 0.5kb downstream 31898 true SL2.50ch03: 63256327-63288224 Solanum lycopersicum
Solyc03g112950.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 63287725-63288224 Solanum lycopersicum
Solyc03g112950.2 1.0kb upstream 1.0kb upstream 32398 true SL2.50ch03: 63255327-63287724 Solanum lycopersicum
Solyc03g112950.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 63255327-63256326 Solanum lycopersicum
Solyc03g112950.2 1.0kb downstream 1.0kb downstream 32398 true SL2.50ch03: 63256327-63288724 Solanum lycopersicum
Solyc03g112950.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 63287725-63288724 Solanum lycopersicum
Solyc03g112950.2 2.0kb upstream 2.0kb upstream 33398 true SL2.50ch03: 63254327-63287724 Solanum lycopersicum
Solyc03g112950.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 63254327-63256326 Solanum lycopersicum
Solyc03g112950.2 2.0kb downstream 2.0kb downstream 33398 true SL2.50ch03: 63256327-63289724 Solanum lycopersicum
Solyc03g112950.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 63287725-63289724 Solanum lycopersicum
Solyc03g112950.2 5.0kb upstream 5.0kb upstream 36398 true SL2.50ch03: 63251327-63287724 Solanum lycopersicum
Solyc03g112950.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 63251327-63256326 Solanum lycopersicum
Solyc03g112950.2 5.0kb downstream 5.0kb downstream 36398 true SL2.50ch03: 63256327-63292724 Solanum lycopersicum
Solyc03g112950.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 63287725-63292724 Solanum lycopersicum
Solyc03g112950.2 10.0kb upstream 10.0kb upstream 41398 true SL2.50ch03: 63246327-63287724 Solanum lycopersicum
Solyc03g112950.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 63246327-63256326 Solanum lycopersicum
Solyc03g112950.2 10.0kb downstream 10.0kb downstream 41398 true SL2.50ch03: 63256327-63297724 Solanum lycopersicum
Solyc03g112950.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 63287725-63297724 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122791338 5272 Eudicot View MSA
121366283 5263 Asterids Singleton cluster - no MSA
123745497 5271 Pentapetalae View MSA
122048248 5273 Angiosperm View MSA
121343788 5274 Embryophyte View MSA
123426906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain