Gene : Solyc03g116040.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11062//PTHR11062:SF99 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Description:  Exostosin family-like protein (AHRD V1 **-- Q6Z527_ORYSJ); contains Interpro domain(s) IPR004263 Exostosin-like
Genomic Order:  2649 Name:  ? Solyc03g116040.2
Secondary Identifier:  ? PAC:36134851
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5980 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g116040.2 0.5kb upstream 0.5kb upstream 4267 true SL2.50ch03: 65563695-65567961 Solanum lycopersicum
Solyc03g116040.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 65567462-65567961 Solanum lycopersicum
Solyc03g116040.2 0.5kb downstream 0.5kb downstream 4267 true SL2.50ch03: 65563195-65567461 Solanum lycopersicum
Solyc03g116040.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 65563195-65563694 Solanum lycopersicum
Solyc03g116040.2 1.0kb upstream 1.0kb upstream 4767 true SL2.50ch03: 65563695-65568461 Solanum lycopersicum
Solyc03g116040.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 65567462-65568461 Solanum lycopersicum
Solyc03g116040.2 1.0kb downstream 1.0kb downstream 4767 true SL2.50ch03: 65562695-65567461 Solanum lycopersicum
Solyc03g116040.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 65562695-65563694 Solanum lycopersicum
Solyc03g116040.2 2.0kb upstream 2.0kb upstream 5767 true SL2.50ch03: 65563695-65569461 Solanum lycopersicum
Solyc03g116040.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 65567462-65569461 Solanum lycopersicum
Solyc03g116040.2 2.0kb downstream 2.0kb downstream 5767 true SL2.50ch03: 65561695-65567461 Solanum lycopersicum
Solyc03g116040.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 65561695-65563694 Solanum lycopersicum
Solyc03g116040.2 5.0kb upstream 5.0kb upstream 8767 true SL2.50ch03: 65563695-65572461 Solanum lycopersicum
Solyc03g116040.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 65567462-65572461 Solanum lycopersicum
Solyc03g116040.2 5.0kb downstream 5.0kb downstream 8767 true SL2.50ch03: 65558695-65567461 Solanum lycopersicum
Solyc03g116040.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 65558695-65563694 Solanum lycopersicum
Solyc03g116040.2 10.0kb upstream 10.0kb upstream 13767 true SL2.50ch03: 65563695-65577461 Solanum lycopersicum
Solyc03g116040.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 65567462-65577461 Solanum lycopersicum
Solyc03g116040.2 10.0kb downstream 10.0kb downstream 13767 true SL2.50ch03: 65553695-65567461 Solanum lycopersicum
Solyc03g116040.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 65553695-65563694 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467323 5263 Asterids View MSA
123736949 5271 Pentapetalae View MSA
122787546 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain