Gene : Solyc03g115980.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Description:  Geranylgeranyl reductase (AHRD V1 ***- Q1ZYL0_OLEEU); contains Interpro domain(s) IPR011774 Geranylgeranyl reductase, plants and cyanobacteria
Genomic Order:  2643 Name:  ? Solyc03g115980.1
Secondary Identifier:  ? PAC:36136471
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5063 Solanum lycopersicum pathologic  
Slycopersicum PWY-5064 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g115980.1 0.5kb upstream 0.5kb upstream 1895 true SL2.50ch03: 65535461-65537355 Solanum lycopersicum
Solyc03g115980.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 65535461-65535960 Solanum lycopersicum
Solyc03g115980.1 0.5kb downstream 0.5kb downstream 1895 true SL2.50ch03: 65535961-65537855 Solanum lycopersicum
Solyc03g115980.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 65537356-65537855 Solanum lycopersicum
Solyc03g115980.1 1.0kb upstream 1.0kb upstream 2395 true SL2.50ch03: 65534961-65537355 Solanum lycopersicum
Solyc03g115980.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 65534961-65535960 Solanum lycopersicum
Solyc03g115980.1 1.0kb downstream 1.0kb downstream 2395 true SL2.50ch03: 65535961-65538355 Solanum lycopersicum
Solyc03g115980.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 65537356-65538355 Solanum lycopersicum
Solyc03g115980.1 2.0kb upstream 2.0kb upstream 3395 true SL2.50ch03: 65533961-65537355 Solanum lycopersicum
Solyc03g115980.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 65533961-65535960 Solanum lycopersicum
Solyc03g115980.1 2.0kb downstream 2.0kb downstream 3395 true SL2.50ch03: 65535961-65539355 Solanum lycopersicum
Solyc03g115980.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 65537356-65539355 Solanum lycopersicum
Solyc03g115980.1 5.0kb upstream 5.0kb upstream 6395 true SL2.50ch03: 65530961-65537355 Solanum lycopersicum
Solyc03g115980.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 65530961-65535960 Solanum lycopersicum
Solyc03g115980.1 5.0kb downstream 5.0kb downstream 6395 true SL2.50ch03: 65535961-65542355 Solanum lycopersicum
Solyc03g115980.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 65537356-65542355 Solanum lycopersicum
Solyc03g115980.1 10.0kb upstream 10.0kb upstream 11395 true SL2.50ch03: 65525961-65537355 Solanum lycopersicum
Solyc03g115980.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 65525961-65535960 Solanum lycopersicum
Solyc03g115980.1 10.0kb downstream 10.0kb downstream 11395 true SL2.50ch03: 65535961-65547355 Solanum lycopersicum
Solyc03g115980.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 65537356-65547355 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470417 5263 Asterids View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain