Gene : Solyc03g115960.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22835//PTHR22835:SF267 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Description:  GDSL esterase/lipase At1g74460 (AHRD V1 ***- GDL31_ARATH); contains Interpro domain(s) IPR001087 Lipase, GDSL
Genomic Order:  2641 Name:  ? Solyc03g115960.2
Secondary Identifier:  ? PAC:36133959
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LIPAS-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g115960.2 0.5kb upstream 0.5kb upstream 2121 true SL2.50ch03: 65528424-65530544 Solanum lycopersicum
Solyc03g115960.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 65530045-65530544 Solanum lycopersicum
Solyc03g115960.2 0.5kb downstream 0.5kb downstream 2121 true SL2.50ch03: 65527924-65530044 Solanum lycopersicum
Solyc03g115960.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 65527924-65528423 Solanum lycopersicum
Solyc03g115960.2 1.0kb upstream 1.0kb upstream 2621 true SL2.50ch03: 65528424-65531044 Solanum lycopersicum
Solyc03g115960.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 65530045-65531044 Solanum lycopersicum
Solyc03g115960.2 1.0kb downstream 1.0kb downstream 2621 true SL2.50ch03: 65527424-65530044 Solanum lycopersicum
Solyc03g115960.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 65527424-65528423 Solanum lycopersicum
Solyc03g115960.2 2.0kb upstream 2.0kb upstream 3621 true SL2.50ch03: 65528424-65532044 Solanum lycopersicum
Solyc03g115960.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 65530045-65532044 Solanum lycopersicum
Solyc03g115960.2 2.0kb downstream 2.0kb downstream 3621 true SL2.50ch03: 65526424-65530044 Solanum lycopersicum
Solyc03g115960.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 65526424-65528423 Solanum lycopersicum
Solyc03g115960.2 5.0kb upstream 5.0kb upstream 6621 true SL2.50ch03: 65528424-65535044 Solanum lycopersicum
Solyc03g115960.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 65530045-65535044 Solanum lycopersicum
Solyc03g115960.2 5.0kb downstream 5.0kb downstream 6621 true SL2.50ch03: 65523424-65530044 Solanum lycopersicum
Solyc03g115960.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 65523424-65528423 Solanum lycopersicum
Solyc03g115960.2 10.0kb upstream 10.0kb upstream 11621 true SL2.50ch03: 65528424-65540044 Solanum lycopersicum
Solyc03g115960.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 65530045-65540044 Solanum lycopersicum
Solyc03g115960.2 10.0kb downstream 10.0kb downstream 11621 true SL2.50ch03: 65518424-65530044 Solanum lycopersicum
Solyc03g115960.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 65518424-65528423 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474293 5263 Asterids View MSA
123747165 5271 Pentapetalae View MSA
122791413 5272 Eudicot View MSA
122042370 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain