Gene : Solyc03g111270.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF02037//PF10172 - SAP domain (SAP) // Det1 complexing ubiquitin ligase (DDA1) Description:  DNA binding protein (AHRD V1 ***- B6T3K5_MAIZE); contains Interpro domain(s) IPR018276 Ubiquitin ligase, Det1/DDB1-complexing
Genomic Order:  2180 Name:  ? Solyc03g111270.2
Secondary Identifier:  ? PAC:36136939
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g111270.2 0.5kb upstream 0.5kb upstream 6089 true SL2.50ch03: 61881783-61887871 Solanum lycopersicum
Solyc03g111270.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 61881783-61882282 Solanum lycopersicum
Solyc03g111270.2 0.5kb downstream 0.5kb downstream 6089 true SL2.50ch03: 61882283-61888371 Solanum lycopersicum
Solyc03g111270.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 61887872-61888371 Solanum lycopersicum
Solyc03g111270.2 1.0kb upstream 1.0kb upstream 6589 true SL2.50ch03: 61881283-61887871 Solanum lycopersicum
Solyc03g111270.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 61881283-61882282 Solanum lycopersicum
Solyc03g111270.2 1.0kb downstream 1.0kb downstream 6589 true SL2.50ch03: 61882283-61888871 Solanum lycopersicum
Solyc03g111270.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 61887872-61888871 Solanum lycopersicum
Solyc03g111270.2 2.0kb upstream 2.0kb upstream 7589 true SL2.50ch03: 61880283-61887871 Solanum lycopersicum
Solyc03g111270.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 61880283-61882282 Solanum lycopersicum
Solyc03g111270.2 2.0kb downstream 2.0kb downstream 7589 true SL2.50ch03: 61882283-61889871 Solanum lycopersicum
Solyc03g111270.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 61887872-61889871 Solanum lycopersicum
Solyc03g111270.2 5.0kb upstream 5.0kb upstream 10589 true SL2.50ch03: 61877283-61887871 Solanum lycopersicum
Solyc03g111270.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 61877283-61882282 Solanum lycopersicum
Solyc03g111270.2 5.0kb downstream 5.0kb downstream 10589 true SL2.50ch03: 61882283-61892871 Solanum lycopersicum
Solyc03g111270.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 61887872-61892871 Solanum lycopersicum
Solyc03g111270.2 10.0kb upstream 10.0kb upstream 15589 true SL2.50ch03: 61872283-61887871 Solanum lycopersicum
Solyc03g111270.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 61872283-61882282 Solanum lycopersicum
Solyc03g111270.2 10.0kb downstream 10.0kb downstream 15589 true SL2.50ch03: 61882283-61897871 Solanum lycopersicum
Solyc03g111270.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 61887872-61897871 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468233 5263 Asterids View MSA
123746630 5271 Pentapetalae View MSA
122792914 5272 Eudicot View MSA
122045612 5273 Angiosperm View MSA
121347246 5274 Embryophyte View MSA
123425668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain