Gene : Solyc03g111150.2 S. lycopersicum ITAG2.4
Defline:  (1 of 6) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Description:  Extracellular ligand-gated ion channel (AHRD V1 ***- D7LAY2_ARALY)
Genomic Order:  2168 Name:  ? Solyc03g111150.2
Secondary Identifier:  ? PAC:36135003
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g111150.2 0.5kb upstream 0.5kb upstream 4093 true SL2.50ch03: 61802707-61806799 Solanum lycopersicum
Solyc03g111150.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 61806300-61806799 Solanum lycopersicum
Solyc03g111150.2 0.5kb downstream 0.5kb downstream 4093 true SL2.50ch03: 61802207-61806299 Solanum lycopersicum
Solyc03g111150.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 61802207-61802706 Solanum lycopersicum
Solyc03g111150.2 1.0kb upstream 1.0kb upstream 4593 true SL2.50ch03: 61802707-61807299 Solanum lycopersicum
Solyc03g111150.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 61806300-61807299 Solanum lycopersicum
Solyc03g111150.2 1.0kb downstream 1.0kb downstream 4593 true SL2.50ch03: 61801707-61806299 Solanum lycopersicum
Solyc03g111150.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 61801707-61802706 Solanum lycopersicum
Solyc03g111150.2 2.0kb upstream 2.0kb upstream 5593 true SL2.50ch03: 61802707-61808299 Solanum lycopersicum
Solyc03g111150.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 61806300-61808299 Solanum lycopersicum
Solyc03g111150.2 2.0kb downstream 2.0kb downstream 5593 true SL2.50ch03: 61800707-61806299 Solanum lycopersicum
Solyc03g111150.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 61800707-61802706 Solanum lycopersicum
Solyc03g111150.2 5.0kb upstream 5.0kb upstream 8593 true SL2.50ch03: 61802707-61811299 Solanum lycopersicum
Solyc03g111150.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 61806300-61811299 Solanum lycopersicum
Solyc03g111150.2 5.0kb downstream 5.0kb downstream 8593 true SL2.50ch03: 61797707-61806299 Solanum lycopersicum
Solyc03g111150.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 61797707-61802706 Solanum lycopersicum
Solyc03g111150.2 10.0kb upstream 10.0kb upstream 13593 true SL2.50ch03: 61802707-61816299 Solanum lycopersicum
Solyc03g111150.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 61806300-61816299 Solanum lycopersicum
Solyc03g111150.2 10.0kb downstream 10.0kb downstream 13593 true SL2.50ch03: 61792707-61806299 Solanum lycopersicum
Solyc03g111150.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 61792707-61802706 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476537 5263 Asterids View MSA
123750273 5271 Pentapetalae View MSA
122773558 5272 Eudicot View MSA
122045832 5273 Angiosperm View MSA
121310512 5274 Embryophyte View MSA
123347975 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain