Gene : Solyc03g097180.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF08378 - Nuclease-related domain (NERD) Description:  (RAP Annotation release2) NERD domain containing protein (AHRD V1 ***- Q336N9_ORYSJ); contains Interpro domain(s) IPR011528 NERD
Genomic Order:  1929 Name:  ? Solyc03g097180.2
Secondary Identifier:  ? PAC:36134785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g097180.2 0.5kb upstream 0.5kb upstream 7637 true SL2.50ch03: 59497348-59504984 Solanum lycopersicum
Solyc03g097180.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 59504485-59504984 Solanum lycopersicum
Solyc03g097180.2 0.5kb downstream 0.5kb downstream 7637 true SL2.50ch03: 59496848-59504484 Solanum lycopersicum
Solyc03g097180.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 59496848-59497347 Solanum lycopersicum
Solyc03g097180.2 1.0kb upstream 1.0kb upstream 8137 true SL2.50ch03: 59497348-59505484 Solanum lycopersicum
Solyc03g097180.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 59504485-59505484 Solanum lycopersicum
Solyc03g097180.2 1.0kb downstream 1.0kb downstream 8137 true SL2.50ch03: 59496348-59504484 Solanum lycopersicum
Solyc03g097180.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 59496348-59497347 Solanum lycopersicum
Solyc03g097180.2 2.0kb upstream 2.0kb upstream 9137 true SL2.50ch03: 59497348-59506484 Solanum lycopersicum
Solyc03g097180.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 59504485-59506484 Solanum lycopersicum
Solyc03g097180.2 2.0kb downstream 2.0kb downstream 9137 true SL2.50ch03: 59495348-59504484 Solanum lycopersicum
Solyc03g097180.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 59495348-59497347 Solanum lycopersicum
Solyc03g097180.2 5.0kb upstream 5.0kb upstream 12137 true SL2.50ch03: 59497348-59509484 Solanum lycopersicum
Solyc03g097180.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 59504485-59509484 Solanum lycopersicum
Solyc03g097180.2 5.0kb downstream 5.0kb downstream 12137 true SL2.50ch03: 59492348-59504484 Solanum lycopersicum
Solyc03g097180.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 59492348-59497347 Solanum lycopersicum
Solyc03g097180.2 10.0kb upstream 10.0kb upstream 17137 true SL2.50ch03: 59497348-59514484 Solanum lycopersicum
Solyc03g097180.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 59504485-59514484 Solanum lycopersicum
Solyc03g097180.2 10.0kb downstream 10.0kb downstream 17137 true SL2.50ch03: 59487348-59504484 Solanum lycopersicum
Solyc03g097180.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 59487348-59497347 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041014 5273 Angiosperm View MSA
121469065 5263 Asterids View MSA
123737845 5271 Pentapetalae View MSA
122786817 5272 Eudicot View MSA
121347889 5274 Embryophyte View MSA
123380667 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain