Gene : Solyc03g083250.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K03544 - ATP-dependent Clp protease ATP-binding subunit ClpX (clpX, CLPX) Description:  ATP-dependent Clp protease ATP-binding subunit clpX (AHRD V1 **** B6SSC5_MAIZE); contains Interpro domain(s) IPR004487 ClpX, ATPase regulatory subunit
Genomic Order:  1545 Name:  ? Solyc03g083250.2
Secondary Identifier:  ? PAC:36135135
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g083250.2 0.5kb upstream 0.5kb upstream 9072 true SL2.50ch03: 53098111-53107182 Solanum lycopersicum
Solyc03g083250.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 53098111-53098610 Solanum lycopersicum
Solyc03g083250.2 0.5kb downstream 0.5kb downstream 9072 true SL2.50ch03: 53098611-53107682 Solanum lycopersicum
Solyc03g083250.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 53107183-53107682 Solanum lycopersicum
Solyc03g083250.2 1.0kb upstream 1.0kb upstream 9572 true SL2.50ch03: 53097611-53107182 Solanum lycopersicum
Solyc03g083250.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 53097611-53098610 Solanum lycopersicum
Solyc03g083250.2 1.0kb downstream 1.0kb downstream 9572 true SL2.50ch03: 53098611-53108182 Solanum lycopersicum
Solyc03g083250.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 53107183-53108182 Solanum lycopersicum
Solyc03g083250.2 2.0kb upstream 2.0kb upstream 10572 true SL2.50ch03: 53096611-53107182 Solanum lycopersicum
Solyc03g083250.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 53096611-53098610 Solanum lycopersicum
Solyc03g083250.2 2.0kb downstream 2.0kb downstream 10572 true SL2.50ch03: 53098611-53109182 Solanum lycopersicum
Solyc03g083250.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 53107183-53109182 Solanum lycopersicum
Solyc03g083250.2 5.0kb upstream 5.0kb upstream 13572 true SL2.50ch03: 53093611-53107182 Solanum lycopersicum
Solyc03g083250.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 53093611-53098610 Solanum lycopersicum
Solyc03g083250.2 5.0kb downstream 5.0kb downstream 13572 true SL2.50ch03: 53098611-53112182 Solanum lycopersicum
Solyc03g083250.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 53107183-53112182 Solanum lycopersicum
Solyc03g083250.2 10.0kb upstream 10.0kb upstream 18572 true SL2.50ch03: 53088611-53107182 Solanum lycopersicum
Solyc03g083250.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 53088611-53098610 Solanum lycopersicum
Solyc03g083250.2 10.0kb downstream 10.0kb downstream 18572 true SL2.50ch03: 53098611-53117182 Solanum lycopersicum
Solyc03g083250.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 53107183-53117182 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470304 5263 Asterids View MSA
123749769 5271 Pentapetalae View MSA
122790976 5272 Eudicot View MSA
122041595 5273 Angiosperm View MSA
121347739 5274 Embryophyte View MSA
123427798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain