Gene : Solyc03g083240.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12549//PTHR12549:SF12 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN // SUBFAMILY NOT NAMED Description:  Transcription factor jumonji domain-containing protein (AHRD V1 **-* D7M504_ARALY); contains Interpro domain(s) IPR013129 Transcription factor jumonji
Genomic Order:  1544 Name:  ? Solyc03g083240.2
Secondary Identifier:  ? PAC:36134978
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g083240.2 0.5kb upstream 0.5kb upstream 9085 true SL2.50ch03: 53089050-53098134 Solanum lycopersicum
Solyc03g083240.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 53089050-53089549 Solanum lycopersicum
Solyc03g083240.2 0.5kb downstream 0.5kb downstream 9085 true SL2.50ch03: 53089550-53098634 Solanum lycopersicum
Solyc03g083240.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 53098135-53098634 Solanum lycopersicum
Solyc03g083240.2 1.0kb upstream 1.0kb upstream 9585 true SL2.50ch03: 53088550-53098134 Solanum lycopersicum
Solyc03g083240.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 53088550-53089549 Solanum lycopersicum
Solyc03g083240.2 1.0kb downstream 1.0kb downstream 9585 true SL2.50ch03: 53089550-53099134 Solanum lycopersicum
Solyc03g083240.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 53098135-53099134 Solanum lycopersicum
Solyc03g083240.2 2.0kb upstream 2.0kb upstream 10585 true SL2.50ch03: 53087550-53098134 Solanum lycopersicum
Solyc03g083240.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 53087550-53089549 Solanum lycopersicum
Solyc03g083240.2 2.0kb downstream 2.0kb downstream 10585 true SL2.50ch03: 53089550-53100134 Solanum lycopersicum
Solyc03g083240.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 53098135-53100134 Solanum lycopersicum
Solyc03g083240.2 5.0kb upstream 5.0kb upstream 13585 true SL2.50ch03: 53084550-53098134 Solanum lycopersicum
Solyc03g083240.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 53084550-53089549 Solanum lycopersicum
Solyc03g083240.2 5.0kb downstream 5.0kb downstream 13585 true SL2.50ch03: 53089550-53103134 Solanum lycopersicum
Solyc03g083240.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 53098135-53103134 Solanum lycopersicum
Solyc03g083240.2 10.0kb upstream 10.0kb upstream 18585 true SL2.50ch03: 53079550-53098134 Solanum lycopersicum
Solyc03g083240.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 53079550-53089549 Solanum lycopersicum
Solyc03g083240.2 10.0kb downstream 10.0kb downstream 18585 true SL2.50ch03: 53089550-53108134 Solanum lycopersicum
Solyc03g083240.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 53098135-53108134 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480798 5263 Asterids View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain