Gene : Solyc09g008410.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) KOG0879//KOG0881 - U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase // Cyclophilin type peptidyl-prolyl cis-trans isomerase Description:  Peptidyl-prolyl cis-trans isomerase (AHRD V1 ***- D8SL30_SELML); contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
Genomic Order:  242 Name:  ? Solyc09g008410.2
Secondary Identifier:  ? PAC:36133758
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g008410.2 0.5kb upstream 0.5kb upstream 8992 true SL2.50ch09: 1861145-1870136 Solanum lycopersicum
Solyc09g008410.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 1869637-1870136 Solanum lycopersicum
Solyc09g008410.2 0.5kb downstream 0.5kb downstream 8992 true SL2.50ch09: 1860645-1869636 Solanum lycopersicum
Solyc09g008410.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 1860645-1861144 Solanum lycopersicum
Solyc09g008410.2 1.0kb upstream 1.0kb upstream 9492 true SL2.50ch09: 1861145-1870636 Solanum lycopersicum
Solyc09g008410.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 1869637-1870636 Solanum lycopersicum
Solyc09g008410.2 1.0kb downstream 1.0kb downstream 9492 true SL2.50ch09: 1860145-1869636 Solanum lycopersicum
Solyc09g008410.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 1860145-1861144 Solanum lycopersicum
Solyc09g008410.2 2.0kb upstream 2.0kb upstream 10492 true SL2.50ch09: 1861145-1871636 Solanum lycopersicum
Solyc09g008410.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 1869637-1871636 Solanum lycopersicum
Solyc09g008410.2 2.0kb downstream 2.0kb downstream 10492 true SL2.50ch09: 1859145-1869636 Solanum lycopersicum
Solyc09g008410.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 1859145-1861144 Solanum lycopersicum
Solyc09g008410.2 5.0kb upstream 5.0kb upstream 13492 true SL2.50ch09: 1861145-1874636 Solanum lycopersicum
Solyc09g008410.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 1869637-1874636 Solanum lycopersicum
Solyc09g008410.2 5.0kb downstream 5.0kb downstream 13492 true SL2.50ch09: 1856145-1869636 Solanum lycopersicum
Solyc09g008410.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 1856145-1861144 Solanum lycopersicum
Solyc09g008410.2 10.0kb upstream 10.0kb upstream 18492 true SL2.50ch09: 1861145-1879636 Solanum lycopersicum
Solyc09g008410.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 1869637-1879636 Solanum lycopersicum
Solyc09g008410.2 10.0kb downstream 10.0kb downstream 18492 true SL2.50ch09: 1851145-1869636 Solanum lycopersicum
Solyc09g008410.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 1851145-1861144 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466256 5263 Asterids View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain