Gene : Solyc03g124030.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR26312:SF0 - TETRATRICOPEPTIDE REPEAT PROTEIN 5 Description:  TPR repeat protein (AHRD V1 *--- A0ZBH5_NODSP); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Genomic Order:  3347 Name:  ? Solyc03g124030.2
Secondary Identifier:  ? PAC:36136673
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7437 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g124030.2 0.5kb upstream 0.5kb upstream 20738 true SL2.50ch03: 70727515-70748252 Solanum lycopersicum
Solyc03g124030.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 70747753-70748252 Solanum lycopersicum
Solyc03g124030.2 0.5kb downstream 0.5kb downstream 20738 true SL2.50ch03: 70727015-70747752 Solanum lycopersicum
Solyc03g124030.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 70727015-70727514 Solanum lycopersicum
Solyc03g124030.2 1.0kb upstream 1.0kb upstream 21238 true SL2.50ch03: 70727515-70748752 Solanum lycopersicum
Solyc03g124030.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 70747753-70748752 Solanum lycopersicum
Solyc03g124030.2 1.0kb downstream 1.0kb downstream 21238 true SL2.50ch03: 70726515-70747752 Solanum lycopersicum
Solyc03g124030.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 70726515-70727514 Solanum lycopersicum
Solyc03g124030.2 2.0kb upstream 2.0kb upstream 22238 true SL2.50ch03: 70727515-70749752 Solanum lycopersicum
Solyc03g124030.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 70747753-70749752 Solanum lycopersicum
Solyc03g124030.2 2.0kb downstream 2.0kb downstream 22238 true SL2.50ch03: 70725515-70747752 Solanum lycopersicum
Solyc03g124030.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 70725515-70727514 Solanum lycopersicum
Solyc03g124030.2 5.0kb upstream 5.0kb upstream 25238 true SL2.50ch03: 70727515-70752752 Solanum lycopersicum
Solyc03g124030.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 70747753-70752752 Solanum lycopersicum
Solyc03g124030.2 5.0kb downstream 5.0kb downstream 25238 true SL2.50ch03: 70722515-70747752 Solanum lycopersicum
Solyc03g124030.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 70722515-70727514 Solanum lycopersicum
Solyc03g124030.2 10.0kb upstream 10.0kb upstream 30238 true SL2.50ch03: 70727515-70757752 Solanum lycopersicum
Solyc03g124030.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 70747753-70757752 Solanum lycopersicum
Solyc03g124030.2 10.0kb downstream 10.0kb downstream 30238 true SL2.50ch03: 70717515-70747752 Solanum lycopersicum
Solyc03g124030.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 70717515-70727514 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041405 5273 Angiosperm View MSA
121466349 5263 Asterids View MSA
123747487 5271 Pentapetalae View MSA
122792226 5272 Eudicot View MSA
121343833 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain