Gene : Solyc09g007540.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11946:SF5 - VALYL-TRNA SYNTHETASE, ISOFORM A Description:  Valyl-tRNA synthetase (AHRD V1 **** Q7G2B1_ORYSJ); contains Interpro domain(s) IPR002303 Valyl-tRNA synthetase, class Ia
Genomic Order:  155 Name:  ? Solyc09g007540.2
Secondary Identifier:  ? PAC:36133163
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g007540.2 0.5kb upstream 0.5kb upstream 13545 true SL2.50ch09: 1126320-1139864 Solanum lycopersicum
Solyc09g007540.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 1126320-1126819 Solanum lycopersicum
Solyc09g007540.2 0.5kb downstream 0.5kb downstream 13545 true SL2.50ch09: 1126820-1140364 Solanum lycopersicum
Solyc09g007540.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 1139865-1140364 Solanum lycopersicum
Solyc09g007540.2 1.0kb upstream 1.0kb upstream 14045 true SL2.50ch09: 1125820-1139864 Solanum lycopersicum
Solyc09g007540.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 1125820-1126819 Solanum lycopersicum
Solyc09g007540.2 1.0kb downstream 1.0kb downstream 14045 true SL2.50ch09: 1126820-1140864 Solanum lycopersicum
Solyc09g007540.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 1139865-1140864 Solanum lycopersicum
Solyc09g007540.2 2.0kb upstream 2.0kb upstream 15045 true SL2.50ch09: 1124820-1139864 Solanum lycopersicum
Solyc09g007540.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 1124820-1126819 Solanum lycopersicum
Solyc09g007540.2 2.0kb downstream 2.0kb downstream 15045 true SL2.50ch09: 1126820-1141864 Solanum lycopersicum
Solyc09g007540.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 1139865-1141864 Solanum lycopersicum
Solyc09g007540.2 5.0kb upstream 5.0kb upstream 18045 true SL2.50ch09: 1121820-1139864 Solanum lycopersicum
Solyc09g007540.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 1121820-1126819 Solanum lycopersicum
Solyc09g007540.2 5.0kb downstream 5.0kb downstream 18045 true SL2.50ch09: 1126820-1144864 Solanum lycopersicum
Solyc09g007540.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 1139865-1144864 Solanum lycopersicum
Solyc09g007540.2 10.0kb upstream 10.0kb upstream 23045 true SL2.50ch09: 1116820-1139864 Solanum lycopersicum
Solyc09g007540.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 1116820-1126819 Solanum lycopersicum
Solyc09g007540.2 10.0kb downstream 10.0kb downstream 23045 true SL2.50ch09: 1126820-1149864 Solanum lycopersicum
Solyc09g007540.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 1139865-1149864 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473719 5263 Asterids View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain