Gene : Solyc03g118790.1 S. lycopersicum ITAG2.4
Defline:  (1 of 174) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7L7Y6_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  2922 Name:  ? Solyc03g118790.1
Secondary Identifier:  ? PAC:36134581
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g118790.1 0.5kb upstream 0.5kb upstream 2856 true SL2.50ch03: 67612199-67615054 Solanum lycopersicum
Solyc03g118790.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 67612199-67612698 Solanum lycopersicum
Solyc03g118790.1 0.5kb downstream 0.5kb downstream 2856 true SL2.50ch03: 67612699-67615554 Solanum lycopersicum
Solyc03g118790.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 67615055-67615554 Solanum lycopersicum
Solyc03g118790.1 1.0kb upstream 1.0kb upstream 3356 true SL2.50ch03: 67611699-67615054 Solanum lycopersicum
Solyc03g118790.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 67611699-67612698 Solanum lycopersicum
Solyc03g118790.1 1.0kb downstream 1.0kb downstream 3356 true SL2.50ch03: 67612699-67616054 Solanum lycopersicum
Solyc03g118790.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 67615055-67616054 Solanum lycopersicum
Solyc03g118790.1 2.0kb upstream 2.0kb upstream 4356 true SL2.50ch03: 67610699-67615054 Solanum lycopersicum
Solyc03g118790.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 67610699-67612698 Solanum lycopersicum
Solyc03g118790.1 2.0kb downstream 2.0kb downstream 4356 true SL2.50ch03: 67612699-67617054 Solanum lycopersicum
Solyc03g118790.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 67615055-67617054 Solanum lycopersicum
Solyc03g118790.1 5.0kb upstream 5.0kb upstream 7356 true SL2.50ch03: 67607699-67615054 Solanum lycopersicum
Solyc03g118790.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 67607699-67612698 Solanum lycopersicum
Solyc03g118790.1 5.0kb downstream 5.0kb downstream 7356 true SL2.50ch03: 67612699-67620054 Solanum lycopersicum
Solyc03g118790.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 67615055-67620054 Solanum lycopersicum
Solyc03g118790.1 10.0kb upstream 10.0kb upstream 12356 true SL2.50ch03: 67602699-67615054 Solanum lycopersicum
Solyc03g118790.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 67602699-67612698 Solanum lycopersicum
Solyc03g118790.1 10.0kb downstream 10.0kb downstream 12356 true SL2.50ch03: 67612699-67625054 Solanum lycopersicum
Solyc03g118790.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 67615055-67625054 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471457 5263 Asterids View MSA
123739048 5271 Pentapetalae View MSA
122788284 5272 Eudicot View MSA
122041778 5273 Angiosperm View MSA
121309888 5274 Embryophyte View MSA
123347524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain