Gene : Solyc03g118340.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) Description:  ATP-dependent clp protease ATP-binding subunit (AHRD V1 **-* Q85G08_CYAME); contains Interpro domain(s) IPR013093 ATPase associated with various cellular activities, AAA-2
Genomic Order:  2879 Name:  ? Solyc03g118340.2
Secondary Identifier:  ? PAC:36135526
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g118340.2 0.5kb upstream 0.5kb upstream 5398 true SL2.50ch03: 67245569-67250966 Solanum lycopersicum
Solyc03g118340.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 67250467-67250966 Solanum lycopersicum
Solyc03g118340.2 0.5kb downstream 0.5kb downstream 5398 true SL2.50ch03: 67245069-67250466 Solanum lycopersicum
Solyc03g118340.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 67245069-67245568 Solanum lycopersicum
Solyc03g118340.2 1.0kb upstream 1.0kb upstream 5898 true SL2.50ch03: 67245569-67251466 Solanum lycopersicum
Solyc03g118340.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 67250467-67251466 Solanum lycopersicum
Solyc03g118340.2 1.0kb downstream 1.0kb downstream 5898 true SL2.50ch03: 67244569-67250466 Solanum lycopersicum
Solyc03g118340.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 67244569-67245568 Solanum lycopersicum
Solyc03g118340.2 2.0kb upstream 2.0kb upstream 6898 true SL2.50ch03: 67245569-67252466 Solanum lycopersicum
Solyc03g118340.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 67250467-67252466 Solanum lycopersicum
Solyc03g118340.2 2.0kb downstream 2.0kb downstream 6898 true SL2.50ch03: 67243569-67250466 Solanum lycopersicum
Solyc03g118340.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 67243569-67245568 Solanum lycopersicum
Solyc03g118340.2 5.0kb upstream 5.0kb upstream 9898 true SL2.50ch03: 67245569-67255466 Solanum lycopersicum
Solyc03g118340.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 67250467-67255466 Solanum lycopersicum
Solyc03g118340.2 5.0kb downstream 5.0kb downstream 9898 true SL2.50ch03: 67240569-67250466 Solanum lycopersicum
Solyc03g118340.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 67240569-67245568 Solanum lycopersicum
Solyc03g118340.2 10.0kb upstream 10.0kb upstream 14898 true SL2.50ch03: 67245569-67260466 Solanum lycopersicum
Solyc03g118340.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 67250467-67260466 Solanum lycopersicum
Solyc03g118340.2 10.0kb downstream 10.0kb downstream 14898 true SL2.50ch03: 67235569-67250466 Solanum lycopersicum
Solyc03g118340.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 67235569-67245568 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478623 5263 Asterids View MSA
123738110 5271 Pentapetalae View MSA
122796801 5272 Eudicot View MSA
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain