Gene : Solyc09g076040.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR21596//PTHR21596:SF11 - RIBONUCLEASE P SUBUNIT P38 // SUBFAMILY NOT NAMED Description:  Protein SUPPRESSOR OF GENE SILENCING 3 homolog (AHRD V1 *--- SGS3_ORYSJ); contains Interpro domain(s) IPR005380 Region of unknown function XS
Genomic Order:  1943 Name:  ? Solyc09g076040.2
Secondary Identifier:  ? PAC:36133342
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g076040.2 0.5kb upstream 0.5kb upstream 9088 true SL2.50ch09: 67718398-67727485 Solanum lycopersicum
Solyc09g076040.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 67718398-67718897 Solanum lycopersicum
Solyc09g076040.2 0.5kb downstream 0.5kb downstream 9088 true SL2.50ch09: 67718898-67727985 Solanum lycopersicum
Solyc09g076040.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 67727486-67727985 Solanum lycopersicum
Solyc09g076040.2 1.0kb upstream 1.0kb upstream 9588 true SL2.50ch09: 67717898-67727485 Solanum lycopersicum
Solyc09g076040.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 67717898-67718897 Solanum lycopersicum
Solyc09g076040.2 1.0kb downstream 1.0kb downstream 9588 true SL2.50ch09: 67718898-67728485 Solanum lycopersicum
Solyc09g076040.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 67727486-67728485 Solanum lycopersicum
Solyc09g076040.2 2.0kb upstream 2.0kb upstream 10588 true SL2.50ch09: 67716898-67727485 Solanum lycopersicum
Solyc09g076040.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 67716898-67718897 Solanum lycopersicum
Solyc09g076040.2 2.0kb downstream 2.0kb downstream 10588 true SL2.50ch09: 67718898-67729485 Solanum lycopersicum
Solyc09g076040.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 67727486-67729485 Solanum lycopersicum
Solyc09g076040.2 5.0kb upstream 5.0kb upstream 13588 true SL2.50ch09: 67713898-67727485 Solanum lycopersicum
Solyc09g076040.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 67713898-67718897 Solanum lycopersicum
Solyc09g076040.2 5.0kb downstream 5.0kb downstream 13588 true SL2.50ch09: 67718898-67732485 Solanum lycopersicum
Solyc09g076040.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 67727486-67732485 Solanum lycopersicum
Solyc09g076040.2 10.0kb upstream 10.0kb upstream 18588 true SL2.50ch09: 67708898-67727485 Solanum lycopersicum
Solyc09g076040.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 67708898-67718897 Solanum lycopersicum
Solyc09g076040.2 10.0kb downstream 10.0kb downstream 18588 true SL2.50ch09: 67718898-67737485 Solanum lycopersicum
Solyc09g076040.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 67727486-67737485 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469493 5263 Asterids View MSA
123737259 5271 Pentapetalae View MSA
122789928 5272 Eudicot View MSA
122042202 5273 Angiosperm View MSA
121309933 5274 Embryophyte View MSA
123347562 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain