Gene : Solyc09g072980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 10) K10523 - speckle-type POZ protein (SPOP) Description:  BTB/POZ domain containing protein expressed (AHRD V1 ***- Q10C73_ORYSJ); contains Interpro domain(s) IPR013089 Kelch related
Genomic Order:  1736 Name:  ? Solyc09g072980.2
Secondary Identifier:  ? PAC:36133428
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g072980.2 0.5kb upstream 0.5kb upstream 6770 true SL2.50ch09: 65641897-65648666 Solanum lycopersicum
Solyc09g072980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 65648167-65648666 Solanum lycopersicum
Solyc09g072980.2 0.5kb downstream 0.5kb downstream 6770 true SL2.50ch09: 65641397-65648166 Solanum lycopersicum
Solyc09g072980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 65641397-65641896 Solanum lycopersicum
Solyc09g072980.2 1.0kb upstream 1.0kb upstream 7270 true SL2.50ch09: 65641897-65649166 Solanum lycopersicum
Solyc09g072980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 65648167-65649166 Solanum lycopersicum
Solyc09g072980.2 1.0kb downstream 1.0kb downstream 7270 true SL2.50ch09: 65640897-65648166 Solanum lycopersicum
Solyc09g072980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 65640897-65641896 Solanum lycopersicum
Solyc09g072980.2 2.0kb upstream 2.0kb upstream 8270 true SL2.50ch09: 65641897-65650166 Solanum lycopersicum
Solyc09g072980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 65648167-65650166 Solanum lycopersicum
Solyc09g072980.2 2.0kb downstream 2.0kb downstream 8270 true SL2.50ch09: 65639897-65648166 Solanum lycopersicum
Solyc09g072980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 65639897-65641896 Solanum lycopersicum
Solyc09g072980.2 5.0kb upstream 5.0kb upstream 11270 true SL2.50ch09: 65641897-65653166 Solanum lycopersicum
Solyc09g072980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 65648167-65653166 Solanum lycopersicum
Solyc09g072980.2 5.0kb downstream 5.0kb downstream 11270 true SL2.50ch09: 65636897-65648166 Solanum lycopersicum
Solyc09g072980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 65636897-65641896 Solanum lycopersicum
Solyc09g072980.2 10.0kb upstream 10.0kb upstream 16270 true SL2.50ch09: 65641897-65658166 Solanum lycopersicum
Solyc09g072980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 65648167-65658166 Solanum lycopersicum
Solyc09g072980.2 10.0kb downstream 10.0kb downstream 16270 true SL2.50ch09: 65631897-65648166 Solanum lycopersicum
Solyc09g072980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 65631897-65641896 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
121477641 5263 Asterids View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain