Gene : Solyc09g047840.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K17888 - ubiquitin-like-conjugating enzyme ATG10, animal type (ATG10L, ATG10) Description:  Autophagy-related protein 10 (AHRD V1 *-*- C1BQN0_9MAXI); contains Interpro domain(s) IPR007135 Autophagy-related protein 3
Genomic Order:  1041 Name:  ? Solyc09g047840.2
Secondary Identifier:  ? PAC:36132703
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g047840.2 0.5kb upstream 0.5kb upstream 6752 true SL2.50ch09: 33514266-33521017 Solanum lycopersicum
Solyc09g047840.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 33514266-33514765 Solanum lycopersicum
Solyc09g047840.2 0.5kb downstream 0.5kb downstream 6752 true SL2.50ch09: 33514766-33521517 Solanum lycopersicum
Solyc09g047840.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 33521018-33521517 Solanum lycopersicum
Solyc09g047840.2 1.0kb upstream 1.0kb upstream 7252 true SL2.50ch09: 33513766-33521017 Solanum lycopersicum
Solyc09g047840.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 33513766-33514765 Solanum lycopersicum
Solyc09g047840.2 1.0kb downstream 1.0kb downstream 7252 true SL2.50ch09: 33514766-33522017 Solanum lycopersicum
Solyc09g047840.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 33521018-33522017 Solanum lycopersicum
Solyc09g047840.2 2.0kb upstream 2.0kb upstream 8252 true SL2.50ch09: 33512766-33521017 Solanum lycopersicum
Solyc09g047840.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 33512766-33514765 Solanum lycopersicum
Solyc09g047840.2 2.0kb downstream 2.0kb downstream 8252 true SL2.50ch09: 33514766-33523017 Solanum lycopersicum
Solyc09g047840.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 33521018-33523017 Solanum lycopersicum
Solyc09g047840.2 5.0kb upstream 5.0kb upstream 11252 true SL2.50ch09: 33509766-33521017 Solanum lycopersicum
Solyc09g047840.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 33509766-33514765 Solanum lycopersicum
Solyc09g047840.2 5.0kb downstream 5.0kb downstream 11252 true SL2.50ch09: 33514766-33526017 Solanum lycopersicum
Solyc09g047840.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 33521018-33526017 Solanum lycopersicum
Solyc09g047840.2 10.0kb upstream 10.0kb upstream 16252 true SL2.50ch09: 33504766-33521017 Solanum lycopersicum
Solyc09g047840.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 33504766-33514765 Solanum lycopersicum
Solyc09g047840.2 10.0kb downstream 10.0kb downstream 16252 true SL2.50ch09: 33514766-33531017 Solanum lycopersicum
Solyc09g047840.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 33521018-33531017 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470986 5263 Asterids View MSA
123738819 5271 Pentapetalae View MSA
122789693 5272 Eudicot View MSA
122045044 5273 Angiosperm View MSA
121344822 5274 Embryophyte View MSA
123380107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain