Gene : Solyc09g014320.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.1.1.205 - tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Description:  Ribosomal RNA large subunit methyltransferase J family protein (AHRD V1 **** A7APJ4_BABBO); contains Interpro domain(s) IPR015507 Ribosomal RNA methyltransferase J
Genomic Order:  627 Name:  ? Solyc09g014320.2
Secondary Identifier:  ? PAC:36133460
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6829 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g014320.2 0.5kb upstream 0.5kb upstream 8898 true SL2.50ch09: 5836883-5845780 Solanum lycopersicum
Solyc09g014320.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 5845281-5845780 Solanum lycopersicum
Solyc09g014320.2 0.5kb downstream 0.5kb downstream 8898 true SL2.50ch09: 5836383-5845280 Solanum lycopersicum
Solyc09g014320.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 5836383-5836882 Solanum lycopersicum
Solyc09g014320.2 1.0kb upstream 1.0kb upstream 9398 true SL2.50ch09: 5836883-5846280 Solanum lycopersicum
Solyc09g014320.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 5845281-5846280 Solanum lycopersicum
Solyc09g014320.2 1.0kb downstream 1.0kb downstream 9398 true SL2.50ch09: 5835883-5845280 Solanum lycopersicum
Solyc09g014320.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 5835883-5836882 Solanum lycopersicum
Solyc09g014320.2 2.0kb upstream 2.0kb upstream 10398 true SL2.50ch09: 5836883-5847280 Solanum lycopersicum
Solyc09g014320.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 5845281-5847280 Solanum lycopersicum
Solyc09g014320.2 2.0kb downstream 2.0kb downstream 10398 true SL2.50ch09: 5834883-5845280 Solanum lycopersicum
Solyc09g014320.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 5834883-5836882 Solanum lycopersicum
Solyc09g014320.2 5.0kb upstream 5.0kb upstream 13398 true SL2.50ch09: 5836883-5850280 Solanum lycopersicum
Solyc09g014320.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 5845281-5850280 Solanum lycopersicum
Solyc09g014320.2 5.0kb downstream 5.0kb downstream 13398 true SL2.50ch09: 5831883-5845280 Solanum lycopersicum
Solyc09g014320.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 5831883-5836882 Solanum lycopersicum
Solyc09g014320.2 10.0kb upstream 10.0kb upstream 18398 true SL2.50ch09: 5836883-5855280 Solanum lycopersicum
Solyc09g014320.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 5845281-5855280 Solanum lycopersicum
Solyc09g014320.2 10.0kb downstream 10.0kb downstream 18398 true SL2.50ch09: 5826883-5845280 Solanum lycopersicum
Solyc09g014320.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 5826883-5836882 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473188 5263 Asterids View MSA
123742065 5271 Pentapetalae View MSA
122791552 5272 Eudicot View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain